Gene RoseRS_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0942 
Symbol 
ID5207888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1161645 
End bp1163231 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content57% 
IMG OID640594556 
Productmagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 
Protein accessionYP_001275301 
Protein GI148655096 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00162998 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC TGATGATCCA GCCGAACTAT CACGCAGGTG GAGCGGAAAT TGCCGGCAAC 
TGGCCGCCGA GTTGGGTTGC ATACATCGGC GGCGCATTGC GGAAAGCGGG ATACTCCAAC
CTGCGCTTTG TCGATGCGAT GACCAACAAT CTGCCGGACA GCACCGTCGC ACAGATCATC
CGCGCCAATC GTCCGGATGT CGTGATGGCG ACAGCGATCA CGCCGATGAT CTACAAGGCG
CAGGAAACGT TGCGCCTGGC GCGTGAAGCC AACCCTGGCT GCAAGACGAT CCTGGGCGGT
GTGCACCCGA CTTTTATGTA TGCGCAGGTA TTGACCGAAG CGCCCTGGAT CGACTACATC
GTGCGCGGCG AAGGGGAAGA GATCATCGTC AACCTGATGC GCGCGATCGA GAATGGCAGT
GATGAACGTG ATCGCCATCA GATTCAGGGA ATTGCGTTCC TGGATGAGGA TCGGGTTGTG
GCGACGCCAG CGCATCCGCC GATTGCCGAC CTTTCGACCC TGACCCCCGA CTGGAGTCTG
CTGGAGTGGG AGAAGTACAT CTACATTCCG CTGAATGTGC GGGTTGCAGT GCCGAACTTT
GCGCGCGGAT GTCCGTTCAC GTGCCGTTTC TGCTCACAAT GGAAATTCTG GCGCAAATAT
CGCGTGCGTG ATCCGATTGC GTTCGTTGAT GAAATCGAAC TGCTGGTGCG CGAATATAAG
ATCGGCTTCT TTATTCTGGC AGACGAGGAG CCGACCATCT ACCGCAAGAA ATTCATTGCG
ATGTGCGAAG AGTTGGAGCG GCGCAAACTC GGCGTTCACT GGGGCATCAA CACTCGCGTC
ACCGACATTC TGCGCGATGA GAAGTACCTG CCGCTCTACC GTCGCGCCGG GTTGGTGCAC
GTCTCGCTGG GCACCGAAGC CGCGGCGCAA ATGAACCTCG ACCGTTTCCG CAAGGAGACG
ACCATCGAGC AGAACAAGCG CGCCATCAGG CTGCTCCAGG ATCAGGGGAT CGTTGCTGAA
GCACAGTTCA TCATGGGTCT GGAGAACGAG ACCCCTGAAA CCATCGAAGA GACGTACCGA
TTTGCGCTCG ACTGGAATGC GGACATGGCG AACTGGAATA TGTACACGCC ATGGCCGTTT
GCCGAGTTGT TCGAGGAACT CGGCGATCGG GTCGAAGTGC GCGACTTCTC GAAGTACAAC
TTCGTTACGC CGATCATCCA GCCGGATGCA ATGACGCGCG AGCAGGTGCT CAAGGGCGTG
CTGCGCAATT ATGCACGTTT CTACATGCGC AAGGCATTCC TGAGTTATCC CTGGATCAAA
GACCCATTCA AGCGGCGCTA TATGCTCGGC TGTTTGAAGG CGTTCGCCAA AACAACCTTC
ACCAAGCGGT TCTACGATCT GGAGCGGGTG CATCTCGACG GTTCGATTGA CCTGGGGTTC
GACGAGACGA AGGTGCTGAC GCGCGAACAG ATCGCAGAGT TGAAGCAGAA GCGCCCCGAA
ATGTCCGCCG ATGTCGATTT TCGTGGTACG ATGACGGTCT GCGGCGCGCC GAAGGATGTG
CCGGAGTACG TGGAACACGA GGGATAA
 
Protein sequence
MRILMIQPNY HAGGAEIAGN WPPSWVAYIG GALRKAGYSN LRFVDAMTNN LPDSTVAQII 
RANRPDVVMA TAITPMIYKA QETLRLAREA NPGCKTILGG VHPTFMYAQV LTEAPWIDYI
VRGEGEEIIV NLMRAIENGS DERDRHQIQG IAFLDEDRVV ATPAHPPIAD LSTLTPDWSL
LEWEKYIYIP LNVRVAVPNF ARGCPFTCRF CSQWKFWRKY RVRDPIAFVD EIELLVREYK
IGFFILADEE PTIYRKKFIA MCEELERRKL GVHWGINTRV TDILRDEKYL PLYRRAGLVH
VSLGTEAAAQ MNLDRFRKET TIEQNKRAIR LLQDQGIVAE AQFIMGLENE TPETIEETYR
FALDWNADMA NWNMYTPWPF AELFEELGDR VEVRDFSKYN FVTPIIQPDA MTREQVLKGV
LRNYARFYMR KAFLSYPWIK DPFKRRYMLG CLKAFAKTTF TKRFYDLERV HLDGSIDLGF
DETKVLTREQ IAELKQKRPE MSADVDFRGT MTVCGAPKDV PEYVEHEG