Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0942 |
Symbol | |
ID | 5207888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1161645 |
End bp | 1163231 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640594556 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_001275301 |
Protein GI | 148655096 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00162998 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TGATGATCCA GCCGAACTAT CACGCAGGTG GAGCGGAAAT TGCCGGCAAC TGGCCGCCGA GTTGGGTTGC ATACATCGGC GGCGCATTGC GGAAAGCGGG ATACTCCAAC CTGCGCTTTG TCGATGCGAT GACCAACAAT CTGCCGGACA GCACCGTCGC ACAGATCATC CGCGCCAATC GTCCGGATGT CGTGATGGCG ACAGCGATCA CGCCGATGAT CTACAAGGCG CAGGAAACGT TGCGCCTGGC GCGTGAAGCC AACCCTGGCT GCAAGACGAT CCTGGGCGGT GTGCACCCGA CTTTTATGTA TGCGCAGGTA TTGACCGAAG CGCCCTGGAT CGACTACATC GTGCGCGGCG AAGGGGAAGA GATCATCGTC AACCTGATGC GCGCGATCGA GAATGGCAGT GATGAACGTG ATCGCCATCA GATTCAGGGA ATTGCGTTCC TGGATGAGGA TCGGGTTGTG GCGACGCCAG CGCATCCGCC GATTGCCGAC CTTTCGACCC TGACCCCCGA CTGGAGTCTG CTGGAGTGGG AGAAGTACAT CTACATTCCG CTGAATGTGC GGGTTGCAGT GCCGAACTTT GCGCGCGGAT GTCCGTTCAC GTGCCGTTTC TGCTCACAAT GGAAATTCTG GCGCAAATAT CGCGTGCGTG ATCCGATTGC GTTCGTTGAT GAAATCGAAC TGCTGGTGCG CGAATATAAG ATCGGCTTCT TTATTCTGGC AGACGAGGAG CCGACCATCT ACCGCAAGAA ATTCATTGCG ATGTGCGAAG AGTTGGAGCG GCGCAAACTC GGCGTTCACT GGGGCATCAA CACTCGCGTC ACCGACATTC TGCGCGATGA GAAGTACCTG CCGCTCTACC GTCGCGCCGG GTTGGTGCAC GTCTCGCTGG GCACCGAAGC CGCGGCGCAA ATGAACCTCG ACCGTTTCCG CAAGGAGACG ACCATCGAGC AGAACAAGCG CGCCATCAGG CTGCTCCAGG ATCAGGGGAT CGTTGCTGAA GCACAGTTCA TCATGGGTCT GGAGAACGAG ACCCCTGAAA CCATCGAAGA GACGTACCGA TTTGCGCTCG ACTGGAATGC GGACATGGCG AACTGGAATA TGTACACGCC ATGGCCGTTT GCCGAGTTGT TCGAGGAACT CGGCGATCGG GTCGAAGTGC GCGACTTCTC GAAGTACAAC TTCGTTACGC CGATCATCCA GCCGGATGCA ATGACGCGCG AGCAGGTGCT CAAGGGCGTG CTGCGCAATT ATGCACGTTT CTACATGCGC AAGGCATTCC TGAGTTATCC CTGGATCAAA GACCCATTCA AGCGGCGCTA TATGCTCGGC TGTTTGAAGG CGTTCGCCAA AACAACCTTC ACCAAGCGGT TCTACGATCT GGAGCGGGTG CATCTCGACG GTTCGATTGA CCTGGGGTTC GACGAGACGA AGGTGCTGAC GCGCGAACAG ATCGCAGAGT TGAAGCAGAA GCGCCCCGAA ATGTCCGCCG ATGTCGATTT TCGTGGTACG ATGACGGTCT GCGGCGCGCC GAAGGATGTG CCGGAGTACG TGGAACACGA GGGATAA
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Protein sequence | MRILMIQPNY HAGGAEIAGN WPPSWVAYIG GALRKAGYSN LRFVDAMTNN LPDSTVAQII RANRPDVVMA TAITPMIYKA QETLRLAREA NPGCKTILGG VHPTFMYAQV LTEAPWIDYI VRGEGEEIIV NLMRAIENGS DERDRHQIQG IAFLDEDRVV ATPAHPPIAD LSTLTPDWSL LEWEKYIYIP LNVRVAVPNF ARGCPFTCRF CSQWKFWRKY RVRDPIAFVD EIELLVREYK IGFFILADEE PTIYRKKFIA MCEELERRKL GVHWGINTRV TDILRDEKYL PLYRRAGLVH VSLGTEAAAQ MNLDRFRKET TIEQNKRAIR LLQDQGIVAE AQFIMGLENE TPETIEETYR FALDWNADMA NWNMYTPWPF AELFEELGDR VEVRDFSKYN FVTPIIQPDA MTREQVLKGV LRNYARFYMR KAFLSYPWIK DPFKRRYMLG CLKAFAKTTF TKRFYDLERV HLDGSIDLGF DETKVLTREQ IAELKQKRPE MSADVDFRGT MTVCGAPKDV PEYVEHEG
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