Gene RoseRS_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0939 
Symbol 
ID5207885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1158362 
End bp1159453 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content60% 
IMG OID640594553 
Producthistidine kinase 
Protein accessionYP_001275298 
Protein GI148655093 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTT GTGCTACACG ATTAATTCGT ATGACCGGCG GGCACAGCGC TATGAGTTCG 
CAGGAAGAGC CAGCAATACC GGTCGCTCTC CGCGAAGCGC GTGACATTGT GGCGGAGCAA
CTGGAGCGGT TGCGCGCGCT GGCGGAACGC GAGCGCCAGG AGGCGCATGC GCTCAATGCC
GCGCTCCGTC AGGCTGAACG CGAACTCGAT GAGGTGACCC TTCAGTACCG CACGGCGCTT
CAGCGGCGAC GCTCAAGCGC CGAAGCGCTT GGCCAGCAGA TGGCAAAACT GCGGGCGCGT
TGCGACGAAT TGACCCGCAA CGTTGATATG CGGCGCAGCG GTTTAAGACA GATAGAACTG
CTGATTCGTC AGATCGAGAT GAGTAGTAGC GCATTGACAA ATACCGGAAC AAGTGCGACA
TCCGATCCAT GGGCGCTGGC GCTGCGTTCG CAGGTCATTC ATGGGCGCGA AGAGGAACGG
GTGCGCCTGG CGCGCGAGGT TCACGACGGA CCAGCGCAGG TGTTGGCGAA TTCGCTGATG
TTGCTCGAAA CCTGTTACAC GCTGGCGCAA CAGCAAACCG GTGAACAGGC TGAAAAACTG
GCGCAGATGC TTGATCGCCT GCGCAGTGCG ACCCGCGACG GATTGAGCGA AGTTCGCCGC
TTTATCGCCA ACCTGCGACC GGGGCAGGTC GCCGAACGCG GTCTGGTTGA AGCATTGCGC
GACTATTTGC GCACCTATGG CAATACCTAC AATGTGCAGG TGACGTTCGA AGCCGATGCC
GTGCCGCGAC AGGCGGACGA AGTCGAGATC GTTCTCTATC GGATTGTCCA GGAGGCGCTT
CAAAACGCAC ACAAATATGC ACGTGGCGCG CCGATCACGG TGCGTCTTGT GCAGCAGGCA
AACACGCTGA TCCTGTCGGT ACGCGATGAG GGACCAGGAT TTGACCCCCG CGAAGTGGCC
CGACGAACCG GCAAAAGCAA CTGGGGGCTG ACGAGTATGC GTGAGCGAGC GGAATTGATC
GGTGCACGCC TGACAGTTGC GTCGCGTCCA GGGCATGGAA CTGAAGTCAC GGTTATACTC
CCACTGGAAT AG
 
Protein sequence
MYICATRLIR MTGGHSAMSS QEEPAIPVAL REARDIVAEQ LERLRALAER ERQEAHALNA 
ALRQAERELD EVTLQYRTAL QRRRSSAEAL GQQMAKLRAR CDELTRNVDM RRSGLRQIEL
LIRQIEMSSS ALTNTGTSAT SDPWALALRS QVIHGREEER VRLAREVHDG PAQVLANSLM
LLETCYTLAQ QQTGEQAEKL AQMLDRLRSA TRDGLSEVRR FIANLRPGQV AERGLVEALR
DYLRTYGNTY NVQVTFEADA VPRQADEVEI VLYRIVQEAL QNAHKYARGA PITVRLVQQA
NTLILSVRDE GPGFDPREVA RRTGKSNWGL TSMRERAELI GARLTVASRP GHGTEVTVIL
PLE