| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0935 |
|---|
| Symbol | |
|---|
| ID | 5207881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1153070 |
|---|
| End bp | 1155346 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640594549 |
|---|
| Product | peptidase domain-containing protein |
|---|
| Protein accession | YP_001275294 |
|---|
| Protein GI | 148655089 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACGCC TGCACCTTCG GTCACTGTCA TTCGCGGCGC TTTTGCTGAT GTTGACGATT
GTTGCCCCTG CGCCACTTGT CGCTGCACCG CAAGATTTTC GCTGGGATCC CGCCTCGCGC
GCGTACACCG TCACCAATCA GACGCCAAAC AATACTGTGC TGGTCGTGAG CGATTTTCGC
CTGCGCAACG ACGATACGAC CGCAGCAACG TTCGTTATTT CCTTCCCGGA GGTTCCGGGC
GGATGGCAGG CGAGTACGAC GATTGCGCAA CCGATTGCGG TCAACCAGGC GACGACGTCG
GCAGTTATTC CTATTCGTAT CATCATTCCG CCGAATACGC CCAACGGCGT GCGTACAGTG
ACCGTCCGCG CAACACGCAC CGATGTGACG CCAAATCAGA CGGCGGAAGC GGTGATTCAG
GTGACGCTGG TTGCCCCGGC GCCAGGGACG CCGCCGCCTT CCGCCTGCCC CGAATTGTCC
GATCCGGGGA ACGACTTCGA CAGCGCTGCG CTGATCCTGG TGGATCGCGC TGAACGCCAC
GGTATCTGCG CCATCGGCGA TGAGGACTGG TTTAAGTTTG GCGCCGTCGC CGGCAAGTAC
TATTCGATCG ATATTCCAGA CATGGATGCC GGTCTCGATC TCTCGCTCGA ACTCTACGAC
TCGAACCGGC GTCTCGTTGA TTCGAACGAT GATTTTCCAT TTCGCGGCGG CACGCAAACG
CTCACCGATA CGCGACCGCT GATCCAGTCG TTCCGCGCGC CGACCAACGG GTTCTTCTAT
GTGCGTGTGC GTGATACCCT GGGGATCGGC GGCAGTAACC TCAGTTACAC GATCATCGTG
CGCGGCGAGA GTTATGGTCC TTTCCCACCC TTCGTTTCAT CGCTCTGTAA CGATATCTAC
GAGCAGGACG GGTTGCCGGA ACTGGCGCGG CAGATCAATC AGAATGAGAC GCAGCGCGGG
CGCCTGCTCT GCCCCAATGG TGACGCGGAT TGGGTGAAGT TCTTTGCGCT TGCCGGGTAT
ACGTACTATC TGTACACCAA CACGCGACCA TACGCGCCGC CAGATGCGAA TGGCGTTCTG
CCCGGCGCCG ATACGCTCCT CTTCCTGTTT GGGCGTGATG CGATCACGCT GATCGATTCG
AACAATAATA TCGAAGGCGG TACAACCCTC GACTCGCTGG TGCGGTTTAC TCCCTCAGCC
GATGGCATTT ACTATGCGCA GGTCAAGAAT GTTGGCGATA TTGGCGGGAT GTTCATTCGC
TACGATCTGA CCCTGAAGGC ATGTCCAGTC GAGCAGCCAG CATGCGGACC CCCGCCGGAT
ATTCTTCCGG CGCCGCCACC GCAGGCGACA GGTAATGTTG TTCCTCTGGC GCAGGAGGTC
GAGCCGCTGA TCGAGGCGAG CGTAGCGCCA CAAGCGGTTC CTGCCCTGGG CGGAGATGCC
AGCGGCGAGA TGATTGTGGC GCTCGCTGGC GCTCAACCAA TTGCGCGCCA GATCGATCCG
TCGTTCATCG GAATCTGGCA ACGGGTCGAT CTGCCGGTGA CAACCGGGCG CGCGAAACGC
GCGTGGGTGT GGGGTCCGGC GCCACGCCTG GCGCGCAGTG AGCCATACAT CCAATCAAGT
ACTGGACTGC GGCAGGTGCT CTATTTCGAC AAGGGACGCC TCGAGATCAA TAACCCTGCG
GGAGATCGCA GCGCTGCTTC GTTCGTCACC GCTGGCTTGC TGGTGTCGGA GATGGTTATG
GGGCAGGTGC AGATCGGTGA TGGTGAGTAT ATGGCGCACC AACCGGCAAT GCTTCCGGTC
GTCGGCGATC TTGATGGCGC GAATGCGCCC ACCTATGCAA TGTTTTCCGC TCTTGCGTCA
CCGGTTGCCG ATCGCACGGG TCTGCCGGTG TCCGAGGCGC TGCTGTCGGA CGGAAGTGTG
CGCCCCATGG TTGGACCGGC GCGTCCAGAG ACGCGCATTG CCCATTTTGT CGCAGCCACG
GGGCATAATA TCCCGCGCAT TTTCTGGGAG TATTTGACAG CATCAGGTGT TGTGTACGAC
AATGGTACCT ACCGTGCCGG TCGGGTCCTG GATTGGGTGA TGGTTGTCGG GTATCCGATC
AGCGAAGCGT ACTGGGTGCG TGTGCGGGTC GGCGGCGTCG AACGTGATGT TCTGGTGCAG
TTGTTCGAGC GTCGCGTGCT GACCTATACC CCCGATGAGC AACCAATGTG GCGGGTGCAG
ATGGGGAATG TCGGGCAGCA CTACTATATC TGGCGCTACG GCAGTTCGTT GCCCTAA
|
|---|
| Protein sequence | MTRLHLRSLS FAALLLMLTI VAPAPLVAAP QDFRWDPASR AYTVTNQTPN NTVLVVSDFR
LRNDDTTAAT FVISFPEVPG GWQASTTIAQ PIAVNQATTS AVIPIRIIIP PNTPNGVRTV
TVRATRTDVT PNQTAEAVIQ VTLVAPAPGT PPPSACPELS DPGNDFDSAA LILVDRAERH
GICAIGDEDW FKFGAVAGKY YSIDIPDMDA GLDLSLELYD SNRRLVDSND DFPFRGGTQT
LTDTRPLIQS FRAPTNGFFY VRVRDTLGIG GSNLSYTIIV RGESYGPFPP FVSSLCNDIY
EQDGLPELAR QINQNETQRG RLLCPNGDAD WVKFFALAGY TYYLYTNTRP YAPPDANGVL
PGADTLLFLF GRDAITLIDS NNNIEGGTTL DSLVRFTPSA DGIYYAQVKN VGDIGGMFIR
YDLTLKACPV EQPACGPPPD ILPAPPPQAT GNVVPLAQEV EPLIEASVAP QAVPALGGDA
SGEMIVALAG AQPIARQIDP SFIGIWQRVD LPVTTGRAKR AWVWGPAPRL ARSEPYIQSS
TGLRQVLYFD KGRLEINNPA GDRSAASFVT AGLLVSEMVM GQVQIGDGEY MAHQPAMLPV
VGDLDGANAP TYAMFSALAS PVADRTGLPV SEALLSDGSV RPMVGPARPE TRIAHFVAAT
GHNIPRIFWE YLTASGVVYD NGTYRAGRVL DWVMVVGYPI SEAYWVRVRV GGVERDVLVQ
LFERRVLTYT PDEQPMWRVQ MGNVGQHYYI WRYGSSLP
|
|---|
| |