| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0882 |
|---|
| Symbol | |
|---|
| ID | 5207828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1096828 |
|---|
| End bp | 1097964 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594499 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275244 |
|---|
| Protein GI | 148655039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0528866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACT TTCCGGTTCC CATCGGCATT GTGGCCGGGG GAGTGGCCAG TGAGGGCCAG
CGGAAGGCGA GCCAGTATGG TCTGCGACCG CCGTTGCTGC GTTTGAGCAG CCGCGACAAC
TGGGACGCCG CATGTGGTGA GCAAGAGTTG ATCCAGCGCA TGGTGGCGCT GGCGCGCGCT
GCCGGTCTTC CTTTTTCTCG CACGTTGATC GTCACCTGCT ATGTGTCGCT GAAGACAAAC
CCGTTCGTTC TTCTGACCGG CATCGAAGGC GCTGGCAAGA CCGAACTGGT GACGTTGTTC
GCCGAAGCGC TACTCGGTCA TGGCAGTCCG CAGTATGCGC TGATCAACGG CGATTCGTCC
TGGCTTACCG CCACGGGGGA TCAGCATTCG TTTCGCTCGT TGTTCGATCG TTTCACCTCA
TTGCGCTTCC TCGAACTGTT ACAGGAGGCC GCCGATCCGG GGAGTGCCGG CAAGGCGTTT
ATCGTCTGCT TCAGTGGCCT GCTGCCGGAA GAGGTGAATT ATTACTTTAC GACCTTGCTG
AGCGTCGATG AGGAGGGGCG TAAACGTTTG CAACTTCCCG GCATTCCTGA GGAAGATCGT
CCTGTCGTGC CGCCGAATGT GTCGATCACG GCAACGGTGA ATACTGCGGA GTATGCTGGC
GTGTTGCACG CGGACGTCTT GCGACGGGCT GGCGTGATCG CCTTTCGGGC CGGGCGGGTC
AATAATCCGA TGTGGCGTCC GCTTGCACCG GCGCCGGTCG GCATACAACG CCTGTGGCTG
CGCGTCGGTC AGCGTGATGC AGTCGCCGCA CGTGATCACC TGTTGCGGAT CATCGGTGCG
ACGCAGTGGA ACCGCATGGA ATGCTCCGAG CCGCTGGCTT CGGCGCTCAG GCGCGCTGGT
ATCGCGCTGC CTCCTCGCCT GCGCCAGGAT GTGATGCGGT ACGTCGCCAA CAGTTTCGAC
GAAGAGGGGC GTGGGTTGTT CGACCCGGAT GATGCGTTGC GGAATGCGCA AATTGCCTTC
GATAGCCAGG TGGCGCAGCG GCTGATCTGG TATCTGCGTG ATGCGCTCGA TCCTCACCTG
CTTACCGCTC TGATGAATGA TCCTGATGCG TCCCGTCCGC TGGCGTGGGC GGGGTAA
|
|---|
| Protein sequence | MLHFPVPIGI VAGGVASEGQ RKASQYGLRP PLLRLSSRDN WDAACGEQEL IQRMVALARA
AGLPFSRTLI VTCYVSLKTN PFVLLTGIEG AGKTELVTLF AEALLGHGSP QYALINGDSS
WLTATGDQHS FRSLFDRFTS LRFLELLQEA ADPGSAGKAF IVCFSGLLPE EVNYYFTTLL
SVDEEGRKRL QLPGIPEEDR PVVPPNVSIT ATVNTAEYAG VLHADVLRRA GVIAFRAGRV
NNPMWRPLAP APVGIQRLWL RVGQRDAVAA RDHLLRIIGA TQWNRMECSE PLASALRRAG
IALPPRLRQD VMRYVANSFD EEGRGLFDPD DALRNAQIAF DSQVAQRLIW YLRDALDPHL
LTALMNDPDA SRPLAWAG
|
|---|
| |