Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0879 |
Symbol | |
ID | 5207825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1094559 |
End bp | 1095395 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640594496 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001275241 |
Protein GI | 148655036 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.101145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATCA TCGTTGTTGA CAACCAGGTC GTTCACTATG AAGTGCTGGG TCGTGGTCGC CCCGTGCTCT TTCTGCATGG CTGGATGGGC AGCTGGCGCT ACTGGTTTCC GACGATGGAG TATGTGAAGC GGTCCTACCG CGCCTACTCG TTCGATTTCT GGGGCTTTGG CGAATCGCGC CGCAAGAGCA CGACCGAGAG CATCCAAAAT TACAGCAATC AGGTTATTCG TTTCCTCGAT GCTCTCGGCA TTGATCGCGT CCTGCTGGTC GGTCACTCGA TGGGCGGTAT GGTAGCGCTC AAAACGGCGA TTGATCATCC CACGCGCATT GCGCGTGTGG TGACAGTGGG CGCTCCAATT GTCGGCTCGT CCCTCTCCTG GTTGCTCAAA CTCACCTATC ATCGACCGCT TGCCGATACC CTGGCGGGTG CTCCCTGGTT GCGGCGTTTT CTGTTTCGCC ACTTCCTGGG CGAAACGAAC GATCCGGCGG TGCACGAAAT CCTCGACGAC AGCCTGAAGT CTTCTGCCAG CACGTTGCAG CGTTCAATCG CCTCGATGTT GTACACCGAC CTGCGCCCGG AACTGCCGAA ACTCGCTGTT CCTGCGCTGA TCGTCCATGG CGGGCGGGAC GAGATCGTGA ACCCCAATCA GGCGGATCTG TTCCACCATG TGCCGCTGGC GCAGGTCGTT GTGATGCCGA AGAGTCGCCA CTTTCCTTTC CTCGATGAGG CTGAGCAGTT CAACACGCTG TTGCTTGGTT TTCTGGCAAA CGATCACTCC TCCTTTCGCA CCGGCATCGC GCCGCAAACG GTAGTACGCT CTTCACTGAT GCCCTGA
|
Protein sequence | MSIIVVDNQV VHYEVLGRGR PVLFLHGWMG SWRYWFPTME YVKRSYRAYS FDFWGFGESR RKSTTESIQN YSNQVIRFLD ALGIDRVLLV GHSMGGMVAL KTAIDHPTRI ARVVTVGAPI VGSSLSWLLK LTYHRPLADT LAGAPWLRRF LFRHFLGETN DPAVHEILDD SLKSSASTLQ RSIASMLYTD LRPELPKLAV PALIVHGGRD EIVNPNQADL FHHVPLAQVV VMPKSRHFPF LDEAEQFNTL LLGFLANDHS SFRTGIAPQT VVRSSLMP
|
| |