Gene RoseRS_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0879 
Symbol 
ID5207825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1094559 
End bp1095395 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content58% 
IMG OID640594496 
Productalpha/beta hydrolase fold 
Protein accessionYP_001275241 
Protein GI148655036 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA TCGTTGTTGA CAACCAGGTC GTTCACTATG AAGTGCTGGG TCGTGGTCGC 
CCCGTGCTCT TTCTGCATGG CTGGATGGGC AGCTGGCGCT ACTGGTTTCC GACGATGGAG
TATGTGAAGC GGTCCTACCG CGCCTACTCG TTCGATTTCT GGGGCTTTGG CGAATCGCGC
CGCAAGAGCA CGACCGAGAG CATCCAAAAT TACAGCAATC AGGTTATTCG TTTCCTCGAT
GCTCTCGGCA TTGATCGCGT CCTGCTGGTC GGTCACTCGA TGGGCGGTAT GGTAGCGCTC
AAAACGGCGA TTGATCATCC CACGCGCATT GCGCGTGTGG TGACAGTGGG CGCTCCAATT
GTCGGCTCGT CCCTCTCCTG GTTGCTCAAA CTCACCTATC ATCGACCGCT TGCCGATACC
CTGGCGGGTG CTCCCTGGTT GCGGCGTTTT CTGTTTCGCC ACTTCCTGGG CGAAACGAAC
GATCCGGCGG TGCACGAAAT CCTCGACGAC AGCCTGAAGT CTTCTGCCAG CACGTTGCAG
CGTTCAATCG CCTCGATGTT GTACACCGAC CTGCGCCCGG AACTGCCGAA ACTCGCTGTT
CCTGCGCTGA TCGTCCATGG CGGGCGGGAC GAGATCGTGA ACCCCAATCA GGCGGATCTG
TTCCACCATG TGCCGCTGGC GCAGGTCGTT GTGATGCCGA AGAGTCGCCA CTTTCCTTTC
CTCGATGAGG CTGAGCAGTT CAACACGCTG TTGCTTGGTT TTCTGGCAAA CGATCACTCC
TCCTTTCGCA CCGGCATCGC GCCGCAAACG GTAGTACGCT CTTCACTGAT GCCCTGA
 
Protein sequence
MSIIVVDNQV VHYEVLGRGR PVLFLHGWMG SWRYWFPTME YVKRSYRAYS FDFWGFGESR 
RKSTTESIQN YSNQVIRFLD ALGIDRVLLV GHSMGGMVAL KTAIDHPTRI ARVVTVGAPI
VGSSLSWLLK LTYHRPLADT LAGAPWLRRF LFRHFLGETN DPAVHEILDD SLKSSASTLQ
RSIASMLYTD LRPELPKLAV PALIVHGGRD EIVNPNQADL FHHVPLAQVV VMPKSRHFPF
LDEAEQFNTL LLGFLANDHS SFRTGIAPQT VVRSSLMP