| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0866 |
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| Symbol | |
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| ID | 5207812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1081386 |
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| End bp | 1082372 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594484 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001275229 |
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| Protein GI | 148655024 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00770341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC GTGAGCGGCT TGCCGCCGCT CTTCGTGGTG AGCCGGTTGA TCGCCCGCCG
GTTGCGTTGT GGCGTCATTT CCCGGTCGAT GACCAGGATC CTGAGCAACT GGCGCAGTCG
GTTGCAGCAT TTCAGGCGCA CTACGACTGG GATTTTGTGA AGTTCACGCC GTCCAGCAGT
TTCTGCGTGG AAGATTGGGG ATGTCGTGCG GTGTACCGTG GGCGCCCCGA AGGCACCAGC
GACTACGTGG CGCGTCCGGT CAGCGTTCCC GCCGACTGGC GTCGGATCGA GCCGCTCGAC
CCATATGCGG GAGCGCTTGG CGCGCACCTG GCTGCGATCC GTCGCGCACG GGAACTGATC
GATCCGGACG TTCCGCTGCT GGCAACGATC TTCAGTCCGA TCAGTCAGGC GAAGAACCTG
ATCGGCGACG GGATGGAGAT CGTCCATCTC CGGCGACACC GATCCGATCT GTTCCACGCA
CTTGAGGCGA TCACCGAAAC CACCATTCGC TTCGTTCAAG CGGCGCTGGC AGCCGGCGCC
GATGGCATTT TTTACGCCAT GCAACGCTGC ACGGCGGATG TCATCAGCGA AGCCGAGTAC
CGCGACGTCT GCAGCCCGCT CGATCTCCGC ATCCTCGAAG CGGTCCACGC TGCACAGAGA
GAGACAACCT TCATTCTGCT CCACCTGCAC GGGCTGTATT CCTACTTCGA CATCGCAGCA
GAATACCCGG CGCAGGCGCT CAACTGGCAC GACCGGGACA CCGGACCGGA CCTCGCGGAA
GGAGCGCGTC GTTTTCCGGG CATGGTCGTC GGCGGGCTGA GTCAGCGTGA CATTGTCGAG
GGTACGCCAG CGACAATTCA GACGCTGGCG CGACAGGCTA TCGATGCCAT GGGTGGGCGG
CGCGTGTGTC TCTCAACCGG TTGCGTTATG CCGACAACCG CGCCATGGGG CAACATTCGA
GCGTTGCGGG CGGCTGTGGA TCGATGA
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| Protein sequence | MTRRERLAAA LRGEPVDRPP VALWRHFPVD DQDPEQLAQS VAAFQAHYDW DFVKFTPSSS
FCVEDWGCRA VYRGRPEGTS DYVARPVSVP ADWRRIEPLD PYAGALGAHL AAIRRARELI
DPDVPLLATI FSPISQAKNL IGDGMEIVHL RRHRSDLFHA LEAITETTIR FVQAALAAGA
DGIFYAMQRC TADVISEAEY RDVCSPLDLR ILEAVHAAQR ETTFILLHLH GLYSYFDIAA
EYPAQALNWH DRDTGPDLAE GARRFPGMVV GGLSQRDIVE GTPATIQTLA RQAIDAMGGR
RVCLSTGCVM PTTAPWGNIR ALRAAVDR
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