Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0843 |
Symbol | |
ID | 5207787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1045694 |
End bp | 1047517 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594459 |
Product | 5'-nucleotidase domain-containing protein |
Protein accession | YP_001275206 |
Protein GI | 148655001 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0234407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGC CCACCATTTC GCGGCGGACC TTCGTGAAAA CGATGGCGGT CGGTTCAGGC ACGATCGCCT ATCTCGCAAC GGCATTGACG GTCCATGGCG CCGGTCCGGA AGTTTACACG CTTCGGATCA TTCACACGAA TGATCACCAC GCGCGCATCG AGCCGGTCTT CAGCGGGAAC AACCCGGTGC ACGGCGGCGT CTCGCGGCGC AAGACCCTGA TCGATGCGAT CCGCGGGGAA GGCGGCAACC AGTTGTTGCT CGACGCCGGC GATGTGTTCC AGGGAACGCT CTATTTTAAC CAGTACCGCG GTCTTGCCGA TCTGGAGTTC TACAACGCCC TCAAATACGA TGCCATGGCG ATTGGCAACC ACGAGTTCGA CATTGGGCAG GGGCCGCTGG TGGATTTTGC GCGCGGTGCA ACGTTCCCGC TGCTCAGCGC GAATATTCAG GTTGATCGCT CGTCGCCGCT GGCGGGCCTG ATCAAGCCGT GGGTTGTGAT CTGGGTCGGT GGGCAACCGA TCGGCATTAT CGGTGTGACA ACCGAGGATA CCCCGGTGCT CAGCAATCCC GGTCCCGGCG TAAGGTTCAC AAACTATATC GAGGCGGTGC GTCTGGGAGT GGCGTCGCTG CGCCGCGATG GCGTGAACAA GATTATTGCG CTGACCCATG TCGGCATTCA GGCAGACCGC GAACTGGCGC GCCGGGTGGA CGGTCTGTCG GTGATCATTG GCGGACATAG CCATACCCCG ATGGGTCCGA TGATCAACCC GCCTGATCCC AATCGCCCCT ACCCTGAAGT TATCGCCTCT CCTTCCGGCA AGCCGGTCAT TGTGGCGCAT GACTGGGAAT GGGGGCGCTG GCTCGGCGAC CTGACGATCG GGTTTGATGC CAATGGCGAC GTGACGCGCG TCGTCGCAGG GCGCCCCACC GAAGTGCGGC CTGCCATCGA TCCAGATGGC GGTTTCGAGA ACCGGATCAG GACGTTCAGA GGTCCGCTGG ATCAACTGCG CGCCACGCCG GTCGGCGAAA CGCGGGTTGC GCTGAACGGC GCCCGCGCTG ATGTGCGCTC GAAGGAGACC AACCTGGGGA ACCTGATCGC GGACTCGATG CTGGCGAAGA CGGCGCCGGC CGGTGCGCAA CTGGCGATTA TGAACGGCGG CGGTATCCGC ACCAGCATTC CCGAAGGACG TATTACGCTT GGTCAGGTGC TCGAAGTGAT GCCGTTCGGC AACACGCTCG TGCTTTTGAC CCTCACCGGC GCGCAGGTGA AGGAAGCGCT GGAGAACGGC GTCAGCCAGG TGGAGCAGTC TGCAGGACGC TTCCCGCAGG TCGGCGGAAT GCGCTATAGC TGGAGCGCCT CGGCGCCAGC CGGGAGCCGC ATCACCGGCA TCCAGGTCTC TGATGGCAGG GGCGGGTTTG TGCCAATCGA CCCGAATGCC AGCTACCGGG TGGTCGTGAA CAACTTCATC GCCGGCGGCG GCGACGGCTA CAGCGTTTTG CAGCGGGGCA CGAACAAGGT CGATACCGGT TTTCTCGATG CTGATGTTCT GGTGGAATAC CTGCAAGCGC GTTCGCCGGT CAATCCGCAG GTTGAGGGAC GCATCGTGCA GGATGGCGTG TTGCCGGGCG TAGCGGGCGT GGCAGCGCCA GCGCCTGCAC CGGTGGAAAC GCCAGCCGCG CTGCCGCGCA CCGGCGGCGA GTCGCTGCCT GCCTGGTTGC TGGCGCTGGC AGCAGCCGGT GCGATTGGCG GCGGTCTGCG GTTGCGTGAA CGTGCGGCGC GCATCGCGGC AGCCAGCGAG CGCGAGACGG TAGAGGTCGA GTAG
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Protein sequence | MAVPTISRRT FVKTMAVGSG TIAYLATALT VHGAGPEVYT LRIIHTNDHH ARIEPVFSGN NPVHGGVSRR KTLIDAIRGE GGNQLLLDAG DVFQGTLYFN QYRGLADLEF YNALKYDAMA IGNHEFDIGQ GPLVDFARGA TFPLLSANIQ VDRSSPLAGL IKPWVVIWVG GQPIGIIGVT TEDTPVLSNP GPGVRFTNYI EAVRLGVASL RRDGVNKIIA LTHVGIQADR ELARRVDGLS VIIGGHSHTP MGPMINPPDP NRPYPEVIAS PSGKPVIVAH DWEWGRWLGD LTIGFDANGD VTRVVAGRPT EVRPAIDPDG GFENRIRTFR GPLDQLRATP VGETRVALNG ARADVRSKET NLGNLIADSM LAKTAPAGAQ LAIMNGGGIR TSIPEGRITL GQVLEVMPFG NTLVLLTLTG AQVKEALENG VSQVEQSAGR FPQVGGMRYS WSASAPAGSR ITGIQVSDGR GGFVPIDPNA SYRVVVNNFI AGGGDGYSVL QRGTNKVDTG FLDADVLVEY LQARSPVNPQ VEGRIVQDGV LPGVAGVAAP APAPVETPAA LPRTGGESLP AWLLALAAAG AIGGGLRLRE RAARIAAASE RETVEVE
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