| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0840 |
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| Symbol | |
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| ID | 5207784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1042504 |
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| End bp | 1043463 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594457 |
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| Product | integron integrase |
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| Protein accession | YP_001275204 |
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| Protein GI | 148654999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.623931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00150822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAGA GAAAACTGGC CGATCGCATC CGCGACGCCA TCCGCCTGCG TGGCTATTCC
ATCCGCACCG AGAAAGCCTA CCTCCATTGG TACGAACGCT TCGTCCGCTT CCACAAACTC
CGCCACCCCG CCGCCATGGG CGCACCGGAG GTTGAAGCCT TCCTCACCCA CCTCGCTGCC
TGCGAGCAGG TTTCCGCTTC CACTCAGAAT CAGGCCCTTG CCGCCCTTCT GTTCCTCTAT
CAGGAAGTTC TCGCCATCCC CCTCGGCGAT GTGCACGCCC TGCGCGCGAA GAAAAGCACC
TACGTCCAGC CCTACCTCAG CCATGACGAA TGCCTGCGCA TCCTCGCCGA ATTGGACGGC
ACGCCTTACC TCGTCGCCTG CCTTCTCTAC GGCAGCGGAC TGCGATTGCT CGAAGCGCTG
CGCCTGCGTA TCCAGGACCT CGATGTTGAG AACTCCCTCA TCACCGTTCG CAACACCAAG
TCCAACCGCG ACCGCGTGAC CTTCCTCCCA GACGAGGAGC GGTTTCTCCA ACGCCTCCGC
GCCCACCTGG AGGGGGTCCG CCGCCTTTAT GAGGTTCACC TTGACGTTCC GGTCTCCATG
CCGCCAGCGC TGGCGCGCAA ATATCCGGGA GCAGCCACCT CCTGGGAATG GCAGTACGTC
TTCCCTTCCC GTGACCTCTC CGTAGACCCC CGTACCCTTG TCGTCAAGAG GCATCACCTC
CACCCCAGCG GTGTTCAGAA GGCCATCACC GCCGCTGTCC ATGCCGCAGG CATGACCAAA
CGCGCCACCG CCCACACCCT GCGCGCTGCC TTCGCTCACC GGCTTAAAGA GGCCGGTTAC
CAGCTCGACG ATATCCAACA ACTCATGGGG CATGCCGACA TTCGCACCAC TCAGCATTAC
CTTGAAGGCC AGGCGCCTGC CTGCAAACGC TTACGCGGTC CCCTATCCTC CAGAACCTGA
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| Protein sequence | MPERKLADRI RDAIRLRGYS IRTEKAYLHW YERFVRFHKL RHPAAMGAPE VEAFLTHLAA
CEQVSASTQN QALAALLFLY QEVLAIPLGD VHALRAKKST YVQPYLSHDE CLRILAELDG
TPYLVACLLY GSGLRLLEAL RLRIQDLDVE NSLITVRNTK SNRDRVTFLP DEERFLQRLR
AHLEGVRRLY EVHLDVPVSM PPALARKYPG AATSWEWQYV FPSRDLSVDP RTLVVKRHHL
HPSGVQKAIT AAVHAAGMTK RATAHTLRAA FAHRLKEAGY QLDDIQQLMG HADIRTTQHY
LEGQAPACKR LRGPLSSRT
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