Gene RoseRS_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0828 
Symbol 
ID5207772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1029067 
End bp1029597 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID640594445 
Productsingle-strand binding protein 
Protein accessionYP_001275192 
Protein GI148654987 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00178667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000998915 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGGG ATCTGAACAA GGTCATGCTG ACCGGTCATC TGGGAGCGGA CCCGGAGATG 
AGGTTCACCC CACAGGGTAG CGCAGTAACG ACATTCCGTG TTGCATCCAA TCGTTCCTGG
AAATCAGGCG ATGGCGTTCA ACACGATGAC ACCGAATGGT TCCGCATTGT CGCCTGGGAC
AAACTGGCGG AAATCTGCAA CGAGTATCTG AAGAAGGGAA CGCGCGTCTA CATCGAGGGG
CGCCTGCAAA CCCGCAGCTG GGATGATCGC AACACCGGTG AGAAACGCTA CATCACCGAA
GTCGTTGCGC AGGATATGAT CATCCTGACG CCAAAGGGTG ATCGTATGCC AGCTGTCGAT
ACGGAAGAGA CGGACGTTCG CGAGGTAGGA AGCGCTCCTC GTCGCGCTCC AGCCCCTTCG
GCGCCTGATA TGCCAGCGCC GGTGTCAAAC GGTCCCGCAC GCGCCAGCGC AACCCGTGCT
CCGGCGCGCA ATACGCCGCA ACCGATCGAG GAAGACGATA TTCCGTTCTG A
 
Protein sequence
MARDLNKVML TGHLGADPEM RFTPQGSAVT TFRVASNRSW KSGDGVQHDD TEWFRIVAWD 
KLAEICNEYL KKGTRVYIEG RLQTRSWDDR NTGEKRYITE VVAQDMIILT PKGDRMPAVD
TEETDVREVG SAPRRAPAPS APDMPAPVSN GPARASATRA PARNTPQPIE EDDIPF