Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0793 |
Symbol | |
ID | 5207736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 983225 |
End bp | 984457 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594409 |
Product | ABC-type Fe3+ transport system periplasmic component-like protein |
Protein accession | YP_001275157 |
Protein GI | 148654952 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.295736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.158194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC AACGCAACAA CCGGCGCTGG TCGCGCCGGG CATTCCTGCG TGTTGCTGTC GGCGCCGGTG CAGGCGCCAT CCTGGCTGCG TGCGGTCAGG CAACAACCAC CGCGCCAACC GCTCCAGCAG CAACCACAGC TCCAGCTGAA GCGACGGCGC CAGCGCAACT CCCGCCACCA CCGGCGCCCG GTCCGCTGAC GGCTGCCGAT GCTGGCGGGA TGGAAAAATT GGTCGAACTG GCGCGCGCCG AAGGCAACCT CTCCACCATC GCTCTGCCGG ACGATTGGGC GAACTATGGA GAGATGAAGA AGAAATTCCT CGAAAAGTAC CCGTTCATCA AACACGAAGA CCTCAACCCC GACGCGAGTT CGGCGCAGGA GATCGAAGCG ATCAAAGCCA ATGCTGGCAG CAAGGGACCG CAGGCGCCCG ATGTGATCGA CGTTGGCTTC ACCTGGGGCA ATACCGCCAA AAAAGAGGGT CTCCTCCAAC CGTACAAGGT TGAGAAGTGG AACGAGATCC CGGATACGCT GAAAGATCCA GAAGGGTTCT GGTACGCCGA CTATTACGGC GTGATGGCGT TCGAGGTGAA TACGCAGGTG GTCAAGAATA TCCCGCAGGA CTGGTCGGAC CTGTTGAAGC CGGAGTACAA GGGACAGATT GCGCTTGCAG GCGACCCCAC CGGTTCGGGA CAGGCGATCA ATGCAGTCTG GGCTGCTGCG CTCGGCAATG GCGGCTCGCT CGATGATCCA ATGCCTGGTC TGGAGTTCTT CAAGCAACTG AACGAAATGG GCAACCTGCT GCCGGTGGTC GCCAAGCCAG CAACCATTGC CAAAGGTGAA ACGCCGATCG CGCTGCGCTG GGACTACAAT GCGCTGGCGA ACCGCGACCA GAATGCTGGC AATATCGACA TCGCCGTGGT GGTGCCGAAG AGTGGTTCGC TGGCAGGCGT GTATGTGCAG GCGATCAGCG CCTATGCGCC GCGCCCGCAT GCCGCGCGCC TGTGGATGGA ATTCCTCTAC TCCGACGAAG GGCAGTTGAT CTGGCTCAAG GGGTATGCGA CACCGGCACG GTTCGAGGCG ATGCGCAAGG CGGGTCTCAT CCCACAGGAT CTGCTCGACA AACTGCCGAA AACCGACGCG CCGGTCGCCT TCCCGACCGG TGATCAGATC AATGCCGCGT TCGACAAGAT CAAGAGTGGC TGGCCCACCA TTGTCGGTGC GACGGTGCAG TAA
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Protein sequence | MSVQRNNRRW SRRAFLRVAV GAGAGAILAA CGQATTTAPT APAATTAPAE ATAPAQLPPP PAPGPLTAAD AGGMEKLVEL ARAEGNLSTI ALPDDWANYG EMKKKFLEKY PFIKHEDLNP DASSAQEIEA IKANAGSKGP QAPDVIDVGF TWGNTAKKEG LLQPYKVEKW NEIPDTLKDP EGFWYADYYG VMAFEVNTQV VKNIPQDWSD LLKPEYKGQI ALAGDPTGSG QAINAVWAAA LGNGGSLDDP MPGLEFFKQL NEMGNLLPVV AKPATIAKGE TPIALRWDYN ALANRDQNAG NIDIAVVVPK SGSLAGVYVQ AISAYAPRPH AARLWMEFLY SDEGQLIWLK GYATPARFEA MRKAGLIPQD LLDKLPKTDA PVAFPTGDQI NAAFDKIKSG WPTIVGATVQ
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