Gene RoseRS_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0793 
Symbol 
ID5207736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp983225 
End bp984457 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content61% 
IMG OID640594409 
ProductABC-type Fe3+ transport system periplasmic component-like protein 
Protein accessionYP_001275157 
Protein GI148654952 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.295736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.158194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTC AACGCAACAA CCGGCGCTGG TCGCGCCGGG CATTCCTGCG TGTTGCTGTC 
GGCGCCGGTG CAGGCGCCAT CCTGGCTGCG TGCGGTCAGG CAACAACCAC CGCGCCAACC
GCTCCAGCAG CAACCACAGC TCCAGCTGAA GCGACGGCGC CAGCGCAACT CCCGCCACCA
CCGGCGCCCG GTCCGCTGAC GGCTGCCGAT GCTGGCGGGA TGGAAAAATT GGTCGAACTG
GCGCGCGCCG AAGGCAACCT CTCCACCATC GCTCTGCCGG ACGATTGGGC GAACTATGGA
GAGATGAAGA AGAAATTCCT CGAAAAGTAC CCGTTCATCA AACACGAAGA CCTCAACCCC
GACGCGAGTT CGGCGCAGGA GATCGAAGCG ATCAAAGCCA ATGCTGGCAG CAAGGGACCG
CAGGCGCCCG ATGTGATCGA CGTTGGCTTC ACCTGGGGCA ATACCGCCAA AAAAGAGGGT
CTCCTCCAAC CGTACAAGGT TGAGAAGTGG AACGAGATCC CGGATACGCT GAAAGATCCA
GAAGGGTTCT GGTACGCCGA CTATTACGGC GTGATGGCGT TCGAGGTGAA TACGCAGGTG
GTCAAGAATA TCCCGCAGGA CTGGTCGGAC CTGTTGAAGC CGGAGTACAA GGGACAGATT
GCGCTTGCAG GCGACCCCAC CGGTTCGGGA CAGGCGATCA ATGCAGTCTG GGCTGCTGCG
CTCGGCAATG GCGGCTCGCT CGATGATCCA ATGCCTGGTC TGGAGTTCTT CAAGCAACTG
AACGAAATGG GCAACCTGCT GCCGGTGGTC GCCAAGCCAG CAACCATTGC CAAAGGTGAA
ACGCCGATCG CGCTGCGCTG GGACTACAAT GCGCTGGCGA ACCGCGACCA GAATGCTGGC
AATATCGACA TCGCCGTGGT GGTGCCGAAG AGTGGTTCGC TGGCAGGCGT GTATGTGCAG
GCGATCAGCG CCTATGCGCC GCGCCCGCAT GCCGCGCGCC TGTGGATGGA ATTCCTCTAC
TCCGACGAAG GGCAGTTGAT CTGGCTCAAG GGGTATGCGA CACCGGCACG GTTCGAGGCG
ATGCGCAAGG CGGGTCTCAT CCCACAGGAT CTGCTCGACA AACTGCCGAA AACCGACGCG
CCGGTCGCCT TCCCGACCGG TGATCAGATC AATGCCGCGT TCGACAAGAT CAAGAGTGGC
TGGCCCACCA TTGTCGGTGC GACGGTGCAG TAA
 
Protein sequence
MSVQRNNRRW SRRAFLRVAV GAGAGAILAA CGQATTTAPT APAATTAPAE ATAPAQLPPP 
PAPGPLTAAD AGGMEKLVEL ARAEGNLSTI ALPDDWANYG EMKKKFLEKY PFIKHEDLNP
DASSAQEIEA IKANAGSKGP QAPDVIDVGF TWGNTAKKEG LLQPYKVEKW NEIPDTLKDP
EGFWYADYYG VMAFEVNTQV VKNIPQDWSD LLKPEYKGQI ALAGDPTGSG QAINAVWAAA
LGNGGSLDDP MPGLEFFKQL NEMGNLLPVV AKPATIAKGE TPIALRWDYN ALANRDQNAG
NIDIAVVVPK SGSLAGVYVQ AISAYAPRPH AARLWMEFLY SDEGQLIWLK GYATPARFEA
MRKAGLIPQD LLDKLPKTDA PVAFPTGDQI NAAFDKIKSG WPTIVGATVQ