Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0789 |
Symbol | |
ID | 5207732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 978548 |
End bp | 979960 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640594405 |
Product | phytoene dehydrogenase and related protein-like protein |
Protein accession | YP_001275153 |
Protein GI | 148654948 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.308572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATG CCGTGGTTGT TGGCGCAGGA CCGAACGGCC TGACTGCGGC GTGCGTTCTG GCGCGCGCCG GGTGGCGGGT ATTGATCATC GAGGCGCGTG AAACGATCGG CGGTGGCGTT TCGTCGGGGG AGATGACGCT GCCCGGTTTC GTTCACGATC TGGGATCGTC GGTGCATCCG TTCGGGATTG CGTCGCCGGT TTTCCGTATG CTTGAGTTGC ACCGCTTTGG GTTGCGCTGG ATTCACCCGC CTGCGCCGGT TGCTCATCCG CTCGACGGTG GGCGCGCTGT GATCCAGGAG CGGTCGGTGC GCGCGACGAC CGCCTGGCTC GGCGGCGATG GCGCTGCCTA TGCGCGTGTG ATGGCGCCGC TGGTGCGTTC GTGGGATCGG ATACAGCCGC TGGTGCTGCA CCCGTTGCGG TTTCCCCGCC ATCCGGTTGC TGCAGCACGC TTCGGGATGC TGGCGCTGCT GCCGGTTACG CTGCTGGCGC GCGCCCTGTT CCGCGACGAA GCAGCGCCCG CATTGCTCGC CGGGCTTGGC GCGCATTCGT TGCTGCCGCT GGAAGCGCCG TTGACAGCGG CGCCAGCGCT CGTGCTCGGC GCGCTCGGTC ACGCGGTTGG CTGGCCCCTG CCCCAGGGCG GAGCGCAATC GATAGCCGAT GCGCTGGCAA CGTGTCTGCG CGCCTGGAGT GGCGAGATAC GAACGGGATG GCATGTGCAG CATATCGATG AATTGCCGAA AGCCAGGGCG TATCTGTTCG ATGTGTCTCC CCGTCAGTTG ATCCAGATTG CCGGTGATCG CCTGCCGCCA GGCTACCGCC GCCGACTGCA ACGTTTTCGC CACGGACCGG GTGTGTTCAA ACTCGATTAT GCGCTCGATG GACCGGTCCC CTGGCGCAAT CCGGCATGTC TGCGCGCCGC AACCCTGCAT CTCGGCGGAA CGCTGGAAGA GATCGCCGAA TCGGAGCGGG CGCCGCATCG CAATGAACAC GCGCTATGCC CATATGTTCT GTTCGTGCAG CCGACGTTGT TCGATCCGAC CCGCGCGCCG CCGGGGAAGC ATACTGGCTG GGCATACTGC CACGTGCCGC ACGGATCGAT GGTTGATATG ACCGCAGCCG TTGAAGCGCA GATCGAGCGT TTTGCGCCCG GTTTTTGCGA TCGCATTCTG GCGCGGCGCG CCATGAACTG TGCCGACATG GAAGCCTGGA ACCCAAACCT GATCGGCGGT GACATCAGTG GCGGGGTACC GGACTGGCGG CAACTGATCA CCAGACCAAC CCTCAGTTTG ACCCCTTATC GCACCCCGGC GCGCGGCATC TATCTCTGCT CTTCCTCGAC GCCGCCGGGT CCGGGAGTGC ACGGCATGTG CGGGTATCAC GCGGCTTCCG CAGCGCTCGC CGACAATGGT TGA
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Protein sequence | MYDAVVVGAG PNGLTAACVL ARAGWRVLII EARETIGGGV SSGEMTLPGF VHDLGSSVHP FGIASPVFRM LELHRFGLRW IHPPAPVAHP LDGGRAVIQE RSVRATTAWL GGDGAAYARV MAPLVRSWDR IQPLVLHPLR FPRHPVAAAR FGMLALLPVT LLARALFRDE AAPALLAGLG AHSLLPLEAP LTAAPALVLG ALGHAVGWPL PQGGAQSIAD ALATCLRAWS GEIRTGWHVQ HIDELPKARA YLFDVSPRQL IQIAGDRLPP GYRRRLQRFR HGPGVFKLDY ALDGPVPWRN PACLRAATLH LGGTLEEIAE SERAPHRNEH ALCPYVLFVQ PTLFDPTRAP PGKHTGWAYC HVPHGSMVDM TAAVEAQIER FAPGFCDRIL ARRAMNCADM EAWNPNLIGG DISGGVPDWR QLITRPTLSL TPYRTPARGI YLCSSSTPPG PGVHGMCGYH AASAALADNG
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