Gene RoseRS_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0789 
Symbol 
ID5207732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp978548 
End bp979960 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content65% 
IMG OID640594405 
Productphytoene dehydrogenase and related protein-like protein 
Protein accessionYP_001275153 
Protein GI148654948 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.308572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGATG CCGTGGTTGT TGGCGCAGGA CCGAACGGCC TGACTGCGGC GTGCGTTCTG 
GCGCGCGCCG GGTGGCGGGT ATTGATCATC GAGGCGCGTG AAACGATCGG CGGTGGCGTT
TCGTCGGGGG AGATGACGCT GCCCGGTTTC GTTCACGATC TGGGATCGTC GGTGCATCCG
TTCGGGATTG CGTCGCCGGT TTTCCGTATG CTTGAGTTGC ACCGCTTTGG GTTGCGCTGG
ATTCACCCGC CTGCGCCGGT TGCTCATCCG CTCGACGGTG GGCGCGCTGT GATCCAGGAG
CGGTCGGTGC GCGCGACGAC CGCCTGGCTC GGCGGCGATG GCGCTGCCTA TGCGCGTGTG
ATGGCGCCGC TGGTGCGTTC GTGGGATCGG ATACAGCCGC TGGTGCTGCA CCCGTTGCGG
TTTCCCCGCC ATCCGGTTGC TGCAGCACGC TTCGGGATGC TGGCGCTGCT GCCGGTTACG
CTGCTGGCGC GCGCCCTGTT CCGCGACGAA GCAGCGCCCG CATTGCTCGC CGGGCTTGGC
GCGCATTCGT TGCTGCCGCT GGAAGCGCCG TTGACAGCGG CGCCAGCGCT CGTGCTCGGC
GCGCTCGGTC ACGCGGTTGG CTGGCCCCTG CCCCAGGGCG GAGCGCAATC GATAGCCGAT
GCGCTGGCAA CGTGTCTGCG CGCCTGGAGT GGCGAGATAC GAACGGGATG GCATGTGCAG
CATATCGATG AATTGCCGAA AGCCAGGGCG TATCTGTTCG ATGTGTCTCC CCGTCAGTTG
ATCCAGATTG CCGGTGATCG CCTGCCGCCA GGCTACCGCC GCCGACTGCA ACGTTTTCGC
CACGGACCGG GTGTGTTCAA ACTCGATTAT GCGCTCGATG GACCGGTCCC CTGGCGCAAT
CCGGCATGTC TGCGCGCCGC AACCCTGCAT CTCGGCGGAA CGCTGGAAGA GATCGCCGAA
TCGGAGCGGG CGCCGCATCG CAATGAACAC GCGCTATGCC CATATGTTCT GTTCGTGCAG
CCGACGTTGT TCGATCCGAC CCGCGCGCCG CCGGGGAAGC ATACTGGCTG GGCATACTGC
CACGTGCCGC ACGGATCGAT GGTTGATATG ACCGCAGCCG TTGAAGCGCA GATCGAGCGT
TTTGCGCCCG GTTTTTGCGA TCGCATTCTG GCGCGGCGCG CCATGAACTG TGCCGACATG
GAAGCCTGGA ACCCAAACCT GATCGGCGGT GACATCAGTG GCGGGGTACC GGACTGGCGG
CAACTGATCA CCAGACCAAC CCTCAGTTTG ACCCCTTATC GCACCCCGGC GCGCGGCATC
TATCTCTGCT CTTCCTCGAC GCCGCCGGGT CCGGGAGTGC ACGGCATGTG CGGGTATCAC
GCGGCTTCCG CAGCGCTCGC CGACAATGGT TGA
 
Protein sequence
MYDAVVVGAG PNGLTAACVL ARAGWRVLII EARETIGGGV SSGEMTLPGF VHDLGSSVHP 
FGIASPVFRM LELHRFGLRW IHPPAPVAHP LDGGRAVIQE RSVRATTAWL GGDGAAYARV
MAPLVRSWDR IQPLVLHPLR FPRHPVAAAR FGMLALLPVT LLARALFRDE AAPALLAGLG
AHSLLPLEAP LTAAPALVLG ALGHAVGWPL PQGGAQSIAD ALATCLRAWS GEIRTGWHVQ
HIDELPKARA YLFDVSPRQL IQIAGDRLPP GYRRRLQRFR HGPGVFKLDY ALDGPVPWRN
PACLRAATLH LGGTLEEIAE SERAPHRNEH ALCPYVLFVQ PTLFDPTRAP PGKHTGWAYC
HVPHGSMVDM TAAVEAQIER FAPGFCDRIL ARRAMNCADM EAWNPNLIGG DISGGVPDWR
QLITRPTLSL TPYRTPARGI YLCSSSTPPG PGVHGMCGYH AASAALADNG