| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0778 |
|---|
| Symbol | |
|---|
| ID | 5207718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 962131 |
|---|
| End bp | 962784 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640594392 |
|---|
| Product | deoxynucleoside kinase |
|---|
| Protein accession | YP_001275143 |
|---|
| Protein GI | 148654938 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1428] Deoxynucleoside kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.330344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.756719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAACG GACGTTACCA CATCACCGTT GCCGGCAATA TCGGCGTCGG CAAAAGCACA
CTGGTCGGCA TCCTGGCAGA AGAGTTCGAC TGGCAACCGT ACTACGAACT GGTTGCCGAC
CATCCATATC TGGAAGATTA CTATCGGGAT CGCGAACGCT GGGGATTTCA TTCGCAGATC
TGGTTTCTGA CCCAGCGTTA CCAGCAGCAC CTCGAGATCG CCGATACGCC GATCTCCGTG
TGTCAGGATC GCAGCATCTA TGAAGACTAC GAGGTCTTCG TGAAAGGGTT GCTGGAACAG
CGCATCCTCA GTCACCGCGA TTTTCGCACC TATCGACAGT TGTTCCTGGC GCTGGTGCAG
AGCATCGCTC CGCCAACCCT GCTGATCCAT CTCCACGCCA GCGTACCAAC GCTGATCCGG
CGCATCAACG AACGCGCGCG CCCTGCCGAG CGCGCTATTC CGCCCGCGTA TCTGGAACAC
CTCAACCGCC GCTACGACGA GTGGCTGCGA CGATTCGAGT TGTGTCCGGT GCTCCGCATT
GAAACCGACG ACCTCGATTT TGCCCACGAT GCCTCGGCGC GGCGCGAAGT GGTCGAGTTG
ATTGCGCAGA CGCTGGGCAT GCGTGGTATG GTGCAGGAAC GCTTCGTACC ATAA
|
|---|
| Protein sequence | MRNGRYHITV AGNIGVGKST LVGILAEEFD WQPYYELVAD HPYLEDYYRD RERWGFHSQI
WFLTQRYQQH LEIADTPISV CQDRSIYEDY EVFVKGLLEQ RILSHRDFRT YRQLFLALVQ
SIAPPTLLIH LHASVPTLIR RINERARPAE RAIPPAYLEH LNRRYDEWLR RFELCPVLRI
ETDDLDFAHD ASARREVVEL IAQTLGMRGM VQERFVP
|
|---|
| |