Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0748 |
Symbol | |
ID | 5207687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 925617 |
End bp | 926543 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594362 |
Product | asparaginase |
Protein accession | YP_001275114 |
Protein GI | 148654909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1446] Asparaginase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000158237 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCATCA TTGGCAGCAG CAATGGCAGG GTGGGGATTG CCGCCGGATG GGCAATCCTG CAGGCGGGCG GTTCGGCGCT GGACGCCGTT GAAGCGGCGA CGCGCCTGGT GGAGGACAAC CCCGACGATC ATTCCGTCGG GTATGGCGGG TACCCCAACC TGCTGGGAGA AGTCGAACTC GACGCCTCGA TCATGGATGG AACGACGCTG CGCGCCGGGG CGGTGGGTGC GTTGAAAGGG TATCGTGCCG CCATCAGCGT AGCCCGGCGC GTGATGGAAG ACCTGCCGCA TGTTGTGCTG GTTGGCGACG GTGCTGCACG CTTTGCCGCT GAAATCGGCA TGCCGCGCGA GAACCTGCTG ACGGAACACG CCGAAAAGGT CTGGCGCGCC GGTCTGGAAG GGCGCACCCT GATTGACTGG CAGGGGGCGC CCGAACTGCT TGCCGCACTC CTGAAGCGCA GCGCGGCGCT GACGCAGGAC CCCGAACACG TCACCGGCAC GGTCAACTTC ATCGCGCAGG ATCGGCAGGG GCGCATTGCA TCGGCGGTCA GCACCAGCGG GTGGGCATGG AAATATCCGG GGCGGCTTGG TGATTCGCCG ATGATCGGCG GCGGCAACTA TGCCGACGAC CGGTATGGAG CAGCGGCATG CACCGGTTGG GGCGAAGCCG CGATCCGCGC CGTGACCGCG CGCAGTGTTG TGCTCTACCT CAAGGTTGGT TACCCGCTCG AAGAGGCATG CCGCGAGGCG TTTCGCGATC TTGCGCCACT CCTGCGCGGC ACGCCCAACA CCATGAGCCT GGTAGCCATT GATCGAAACG GCAATCATTG CGCCATGACC ACAGCCGAAG AGCGTACCTA TGTGTATCAG GCCGACGGCA TGGATCATTT CGTAGAATTA CCGCGGATCG TCGTGACCAT CGACTGA
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Protein sequence | MIIIGSSNGR VGIAAGWAIL QAGGSALDAV EAATRLVEDN PDDHSVGYGG YPNLLGEVEL DASIMDGTTL RAGAVGALKG YRAAISVARR VMEDLPHVVL VGDGAARFAA EIGMPRENLL TEHAEKVWRA GLEGRTLIDW QGAPELLAAL LKRSAALTQD PEHVTGTVNF IAQDRQGRIA SAVSTSGWAW KYPGRLGDSP MIGGGNYADD RYGAAACTGW GEAAIRAVTA RSVVLYLKVG YPLEEACREA FRDLAPLLRG TPNTMSLVAI DRNGNHCAMT TAEERTYVYQ ADGMDHFVEL PRIVVTID
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