Gene RoseRS_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0748 
Symbol 
ID5207687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp925617 
End bp926543 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID640594362 
Productasparaginase 
Protein accessionYP_001275114 
Protein GI148654909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000158237 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCATCA TTGGCAGCAG CAATGGCAGG GTGGGGATTG CCGCCGGATG GGCAATCCTG 
CAGGCGGGCG GTTCGGCGCT GGACGCCGTT GAAGCGGCGA CGCGCCTGGT GGAGGACAAC
CCCGACGATC ATTCCGTCGG GTATGGCGGG TACCCCAACC TGCTGGGAGA AGTCGAACTC
GACGCCTCGA TCATGGATGG AACGACGCTG CGCGCCGGGG CGGTGGGTGC GTTGAAAGGG
TATCGTGCCG CCATCAGCGT AGCCCGGCGC GTGATGGAAG ACCTGCCGCA TGTTGTGCTG
GTTGGCGACG GTGCTGCACG CTTTGCCGCT GAAATCGGCA TGCCGCGCGA GAACCTGCTG
ACGGAACACG CCGAAAAGGT CTGGCGCGCC GGTCTGGAAG GGCGCACCCT GATTGACTGG
CAGGGGGCGC CCGAACTGCT TGCCGCACTC CTGAAGCGCA GCGCGGCGCT GACGCAGGAC
CCCGAACACG TCACCGGCAC GGTCAACTTC ATCGCGCAGG ATCGGCAGGG GCGCATTGCA
TCGGCGGTCA GCACCAGCGG GTGGGCATGG AAATATCCGG GGCGGCTTGG TGATTCGCCG
ATGATCGGCG GCGGCAACTA TGCCGACGAC CGGTATGGAG CAGCGGCATG CACCGGTTGG
GGCGAAGCCG CGATCCGCGC CGTGACCGCG CGCAGTGTTG TGCTCTACCT CAAGGTTGGT
TACCCGCTCG AAGAGGCATG CCGCGAGGCG TTTCGCGATC TTGCGCCACT CCTGCGCGGC
ACGCCCAACA CCATGAGCCT GGTAGCCATT GATCGAAACG GCAATCATTG CGCCATGACC
ACAGCCGAAG AGCGTACCTA TGTGTATCAG GCCGACGGCA TGGATCATTT CGTAGAATTA
CCGCGGATCG TCGTGACCAT CGACTGA
 
Protein sequence
MIIIGSSNGR VGIAAGWAIL QAGGSALDAV EAATRLVEDN PDDHSVGYGG YPNLLGEVEL 
DASIMDGTTL RAGAVGALKG YRAAISVARR VMEDLPHVVL VGDGAARFAA EIGMPRENLL
TEHAEKVWRA GLEGRTLIDW QGAPELLAAL LKRSAALTQD PEHVTGTVNF IAQDRQGRIA
SAVSTSGWAW KYPGRLGDSP MIGGGNYADD RYGAAACTGW GEAAIRAVTA RSVVLYLKVG
YPLEEACREA FRDLAPLLRG TPNTMSLVAI DRNGNHCAMT TAEERTYVYQ ADGMDHFVEL
PRIVVTID