Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0744 |
Symbol | panC |
ID | 5207683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 921934 |
End bp | 922770 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594358 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_001275110 |
Protein GI | 148654905 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.809915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00112992 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGTGA TTACCACGAT TGCCGAGTTG CGCACCGCGC GCGCCGCTCT CCAGGGCACG ACAGGTCTTG TGCCGACCAT GGGGTATCTG CACGAGGGGC ATCTCTCGCT GGTGCGTCGC GCCCGTGCCG AGAACGATCA CGTCATCACA ACAATCTTTG TCAACCCGAC GCAGTTTGGT CCTTCAGAAG ACCTGACGCG CTACCCGCGC GACCTTCCGC GCGATCTGGC GCTCCTGGAA GCCGAGAAGG TCGATCTGGT CTTCGCACCG GACGTTTCTG AGATGTATCC GCCGGGGTTC GGCACTTTCA TCGATGTGGG ACCAATCGCT GCGCCGCTGG AAGGGGCAGC GCGCCCTGGT CATTTCCGCG GCGTTGCAAC CGTCGTCTGC AAATTGTTCG CCATTACGTC GCCGCACCGC GCCTATTTTG GGCAGAAAGA CGCTCAACAG ACGCTGGTGA TCCGCCGGAT GACACTCGAC CTGAACCTTC CGGTCGAGAT TGTTGTCTGC CCGATTGTGC GTGAGCCGGA TGGCCTGGCA ATGAGCAGTC GCAATGTCTA CCTGAACCCG GAGGAGCGCC GCGCTGCGAC GGTGTTGTTC CGTGCACTGC GTGCAGTGCA GGAACGCTTC GCCGCTGGCG AACGCAACGG CGACGCGCTC CGCGCCGCCA TGCGCGCCGT GATCGACGCC GAGCCGCTGG CGCGCGCCGA TTATGTCAGC GTTGCCGACC TCGACGATCT CCACGAACTG GAGACGGTGA CCAACCGCGC TCTGGCGTCG CTCGCCGTGC GGATCGGGAC GACGAGATTG ATCGATAATT GTGTGCTTGA GGCGTGA
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Protein sequence | MRVITTIAEL RTARAALQGT TGLVPTMGYL HEGHLSLVRR ARAENDHVIT TIFVNPTQFG PSEDLTRYPR DLPRDLALLE AEKVDLVFAP DVSEMYPPGF GTFIDVGPIA APLEGAARPG HFRGVATVVC KLFAITSPHR AYFGQKDAQQ TLVIRRMTLD LNLPVEIVVC PIVREPDGLA MSSRNVYLNP EERRAATVLF RALRAVQERF AAGERNGDAL RAAMRAVIDA EPLARADYVS VADLDDLHEL ETVTNRALAS LAVRIGTTRL IDNCVLEA
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