| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0727 |
|---|
| Symbol | |
|---|
| ID | 5207666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 895501 |
|---|
| End bp | 898710 |
|---|
| Gene Length | 3210 bp |
|---|
| Protein Length | 1069 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594341 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001275093 |
|---|
| Protein GI | 148654888 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.3975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTTC AGCCCGTCGA TACCAGGGTC AACTTTCCAC GACTCGAAGA GCAGGTGCTC
GACCTGTGGC AAACCAGGCG GATCGTCGAG CGAAGCCTGG AGTCTGGCGA TAAACCGTTT
GTCTTTTACG AGGGTCCGCC GACGGCGAAT GGTCGTCCCG GCATCCACCA CGCAATCTCG
CGCATTTTCA AGGATGTCAT CTGTCGCTAC CGGGCAATGC AGGGCTACCG GATCATCGGA
CGACGCGAAG GATGGGATAC CCACGGTCTG CCGGTGGAGA TCGAGGTTGA AAAGAAACTC
GGTTTCAGCG GCAAGCCCGA TATCGAGAAG TACGGCGTGG CGGAGTTCAA CGCACAGTGC
CGCAAGAGCG TCTGGGAGTA TATTCAGGAC TGGCGGCAGT TCACCCGCCG CATTGCGTAC
TGGGTCAGTG ACGATGCCTA TATCACATAT GAGAATGACT ATATCGAGTC GCTCTGGTGG
ATCTTCCGTC AGTTATGGGA TCGTGGATTA CTCTTCCGCG ACTACAAGGT ATCGATGCAC
TGCCCGCGCT GTGGAACATC TCTCTCGGAT CACGAGGTAT CGCTCGGTTT CAGGGACGAC
GTTGATGATC CGAGTGTGTG GGTAAAGTTC CGTGTGCGCG AGACGAACCA GGAGGCGCTG
CGCGGCGCGG CATTCCTGGC GTGGACGACG ACGCCCTGGA CGTTGCCAGC GAACGTGGCG
CTGGCGGTCA AGCCTGATGC AACCTATGTG CTCGCCTCGT TCGACGGCGA GCGTCTGGTG
CTGGCGGAGG CGCTGGTCCA CACGGTGCTG GGCGATGGCG TGACGATTGA GCAGACATTC
CGTGGCGCCG ATCTGGTGGG AACACGCTAC GAAAACCTGT TTGATGGCGT ACCCGCTCCC
GGCGACACGG TCGACTGGTC GCGCGCCTAT ACCGTTGTCG CCGATGATTT TGTGTCGCTG
GAGGATGGCA CCGGCATTGT GCACATCGCA CCTGCCTATG GCGACCTTGA GATCGGCAGG
AAGTACGGCT TGCCGACCCT CTTCTCGGTT GACCTGTCAG GCAATGTGCT GCCAGAGTTT
GCATCGCTCG GCTTTGCTGG CAAGTTCTTC AAACAGGCAG ACCCGGATAT CACGCGCAAC
CTGAGGACGC GTGGTTTGTT GCTGAAGAGC GGGCGCGTCA AGCACTCGTA CCCCTTCTGC
TGGCGTTGCG ACACGCCGCT CCTCTACTAC GCCAAACGCT CGTGGTACAT CCGCACCACC
GCAATGAAGG ATCGTCTGGT GGCGAACAAC CGGTTGATCA ACTGGGTGCC GGAGCACATT
CGCGAAGGAC GGTTCGGTAA CTGGCTGGAA AACAACATCG ACTGGGCGGT GAGTCGTGAG
CGCTACTGGG GGACGCCGAT CCCAATCTGG GTAGCGGAAG ACGGCTACGC CGAGTGCATC
GGCTCGCTGG CAGAACTGGA GCAAAAAGTG GGGCGCAGCC TGAAAGACCT CGATCTGCAC
CGTCCCTATG TCGATGAACT CACCTGGGTC GATCCGCAGC ACGGTCTGAT GCGGCGCATC
CCCGACGTTG CTGATTGCTG GTTCGACTCA GGTGCGATGC CGGTGGCGCA GTGGCACTAT
CCGATGGAGA ACGCCGAGAT CTACGAACTG GCAAAGCAGG CGGATTACAT CTGCGAAGCG
GTGGATCAGA CCCGTGGATG GTTCTACACG CTGCACGCGC TCTCAACCCT GCTGTTCGAC
CGCCCGGCGT TCAAGAATGT CATCTGCCTG GGGCACATTC TCGACGCCGA AGGGCAGAAG
ATGAGCAAGT CGCGCGGCAA TGTCGTCGAT CCCTGGATGG TGATGAACGA GCATGGCGCC
GACGCGCTGC GCTGGTATCT GTTCACCGCT GCGCCCCCCG GCAGTCCGCG ACGCTTTTCG
GCAGGGCTGG TCGCTGAGAG TTTACGCAAG TTCCTGCTGA CGCTGTGGAA TACCTATGCG
TTCTTTGTGA CCTACGCCAA CCTGGATGGC TGGAGTCCGG GGAACAATGG CGTTGCGGAA
CACCTCGATC CGGCGACGCT CACTCCGATC GATCGCTGGG CGCTGGCGCG GCTGAACAGT
CTGGTGCGCG ATGTGACCGC CGCCTTTGAA GCCTATGATG TCACGACGGC GGGACGCGCC
ATCGAGGATT TCGTTGATGA ACTGTCGAAC TGGTACGTGC GGCGCAACCG GCGCCGCTTC
TGGAAGAGCG AGCACGACCG TGACAAGCAG GCAGCATATG CAACGCTCTA CACCTGTCTG
CTCACCGTCG CAAAACTGGT GGCGCCATTC ATTCCGTTCG TGGCAGATGC GATCTACCGC
AACCTGGTTG GGCTGGAGGC ACAGGAAGCC TCCCCCGATA CGCCGGAGAG CGTTCACCTC
GCGGCATGGC CCGTCGTCAA CGAGGCGCTC CTCGATGACC GCCTGGTGGA CGATACAGAA
GTGCTGTTGA AAGCCGTTTC GGTCGGTCGC GCAGCGCGGC GCGCAGCGGG CATCAAAGTG
CGTCAACCGC TGCGCGAGAT GTGGGTGCGC GCCCCAACCC CCGCCGCGCT TGAAGGGTTG
CGTCGCTTTG AGGCGGAACT GCGCGAAGAA CTCAACGTCA AAGCAGTGCG CTACCTCGAC
AGCGCAACCA GCCTGGTCGA GTACCGCTTC AAACCCAACC TGCGCCTGGT CGGTCGCAAA
TACGGCAAAC TGGTGCCAGC GCTCACTGAG GCGCTCCGCG ACCTGACGGG CGATGCAGCG
CGCGCGGCGG CGCAGGCGGT CGAAGAGGGG CGGAACATCA CCCTCTCCAT TGAAGGGCAG
ACCATCGAAC TTCTGCCGGA AGAGGTGCTG GTCGAAAGCA GTTCTCCGCA GGGGTACGCG
GTCGCCGAGG ATGGCGGCGT TCTGGTTGCG CTCGACACCA CCCTGACGCC GGAATTGACG
ATGGAAGGGC TGGCGCGCGA ACTGGTGCGC AATATTCAGG ATGCGCGCAA AGATGCCGGG
TTTGCTATCA GCGACCGGAT CATCGTCTAT CTGGGCGGCG CCGACGGCGA CGCTGAGGTA
GAAGCCATGC TGCGCGCCTG GGGCGACTAT GTGCGTGAAG AGACGCTGGC GGACGACCTG
CGCCTCTGTG CGCCGCCGGA TCACGTACAC ACCACAACGC TGGAACTCGA TGGGGGGCGC
ACGCTCATCA TCGGCGTCAG CCGGCGTTAA
|
|---|
| Protein sequence | MAFQPVDTRV NFPRLEEQVL DLWQTRRIVE RSLESGDKPF VFYEGPPTAN GRPGIHHAIS
RIFKDVICRY RAMQGYRIIG RREGWDTHGL PVEIEVEKKL GFSGKPDIEK YGVAEFNAQC
RKSVWEYIQD WRQFTRRIAY WVSDDAYITY ENDYIESLWW IFRQLWDRGL LFRDYKVSMH
CPRCGTSLSD HEVSLGFRDD VDDPSVWVKF RVRETNQEAL RGAAFLAWTT TPWTLPANVA
LAVKPDATYV LASFDGERLV LAEALVHTVL GDGVTIEQTF RGADLVGTRY ENLFDGVPAP
GDTVDWSRAY TVVADDFVSL EDGTGIVHIA PAYGDLEIGR KYGLPTLFSV DLSGNVLPEF
ASLGFAGKFF KQADPDITRN LRTRGLLLKS GRVKHSYPFC WRCDTPLLYY AKRSWYIRTT
AMKDRLVANN RLINWVPEHI REGRFGNWLE NNIDWAVSRE RYWGTPIPIW VAEDGYAECI
GSLAELEQKV GRSLKDLDLH RPYVDELTWV DPQHGLMRRI PDVADCWFDS GAMPVAQWHY
PMENAEIYEL AKQADYICEA VDQTRGWFYT LHALSTLLFD RPAFKNVICL GHILDAEGQK
MSKSRGNVVD PWMVMNEHGA DALRWYLFTA APPGSPRRFS AGLVAESLRK FLLTLWNTYA
FFVTYANLDG WSPGNNGVAE HLDPATLTPI DRWALARLNS LVRDVTAAFE AYDVTTAGRA
IEDFVDELSN WYVRRNRRRF WKSEHDRDKQ AAYATLYTCL LTVAKLVAPF IPFVADAIYR
NLVGLEAQEA SPDTPESVHL AAWPVVNEAL LDDRLVDDTE VLLKAVSVGR AARRAAGIKV
RQPLREMWVR APTPAALEGL RRFEAELREE LNVKAVRYLD SATSLVEYRF KPNLRLVGRK
YGKLVPALTE ALRDLTGDAA RAAAQAVEEG RNITLSIEGQ TIELLPEEVL VESSSPQGYA
VAEDGGVLVA LDTTLTPELT MEGLARELVR NIQDARKDAG FAISDRIIVY LGGADGDAEV
EAMLRAWGDY VREETLADDL RLCAPPDHVH TTTLELDGGR TLIIGVSRR
|
|---|
| |