Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0714 |
Symbol | |
ID | 5207653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 885704 |
End bp | 886081 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640594328 |
Product | hypothetical protein |
Protein accession | YP_001275080 |
Protein GI | 148654875 |
COG category | [S] Function unknown |
COG ID | [COG2929] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0074508 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCA CGTCTCGTCT GAAGGTCGCG TATGCTATCA TATACCTGGC ACGAAGCGAA TGCGCAGGCT GTTGCGTGAT GGATGTTGTC TATCGACTCC AGGGTGTCGA ATTTGAGTGG GATGACCAGA AGTCCCGACT CAACATCGTC AACCACGGCG TAACCTTTGA GGAAGCTGCC GAGGTCTTTT TTGATCCATT CTATCAATAT GGAGATGCTA CTCCAAACGA TGTCAACGAG CAGCGCAATT TTGTCCTGGG CTACCCGGTC GCGCAACGCT TATTGCTGGT TGTCTACACC GAGCGACGCG AGCGAACGCG GATTATCTCT GCACGATTGG CAACGCGCGC AGAAAGGAAA CTCTATGAGT CAGCCTGA
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Protein sequence | MLATSRLKVA YAIIYLARSE CAGCCVMDVV YRLQGVEFEW DDQKSRLNIV NHGVTFEEAA EVFFDPFYQY GDATPNDVNE QRNFVLGYPV AQRLLLVVYT ERRERTRIIS ARLATRAERK LYESA
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