| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0711 |
|---|
| Symbol | |
|---|
| ID | 5207650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 883417 |
|---|
| End bp | 883815 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640594325 |
|---|
| Product | NifU family SUF system FeS assembly protein |
|---|
| Protein accession | YP_001275077 |
|---|
| Protein GI | 148654872 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.397203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATC TGTACCGCGA ACTTATCCTC GAACACTACA AGCATCCGCG TCGTCGCGGT
CGCATCGACC ATCCCGACGT CAGCGCTGAG GAGCATAATC CGCTGTGCGG CGATCGAGTG
CGGATCGACC TGCGGATCGA GAATGGCATC ATCACCGATG CGCGCTTCGA TGGGCGCGGA
TGCGCCATCA GTCAGGCGTC GGCATCGATG TTGACCGAGG AAATTGTCGG GATGCCGGTT
GAACAGGCAA AGCAGTTCAG CAAGGATCAG ATGCTTGCGC TGATCGGCAT TCCGTTGAAC
CATAATCCGG TGCGCATCAA GTGCGCCTTG CTTCCGCTCA AAACACTCAA GGTCGGGTTG
TATGGCGTGG GTCATGCGCC CGATGATGAT GAGATGTGA
|
|---|
| Protein sequence | MDDLYRELIL EHYKHPRRRG RIDHPDVSAE EHNPLCGDRV RIDLRIENGI ITDARFDGRG
CAISQASASM LTEEIVGMPV EQAKQFSKDQ MLALIGIPLN HNPVRIKCAL LPLKTLKVGL
YGVGHAPDDD EM
|
|---|
| |