Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0684 |
Symbol | |
ID | 5207622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 849370 |
End bp | 849987 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640594298 |
Product | hypothetical protein |
Protein accession | YP_001275051 |
Protein GI | 148654846 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.08866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00090668 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGTAG CCGCATACAC GCCTCCAATG CGCCTGGTGA TCGCGGGGGA AATGACCGAT ATCGACCTGA GCGTGATCCA GGGGATGTGG AGCGTTGAAC AGTATGTGCG CCTGACCGAT CACACGAACC GTCTCATCGA GTATTCGGAT GGATGGATTG AGATCCTGCC CATGCCAACC GAACGACATC AGGCAATACT CGAGTGTTTG TTTCTCTTCT TTCGTGCATA TGCGGACAGT CATGGCGGGA AAGTGCGCTT TGCACCGCTG CGTCTGCTTG TGCGCGATGG GAAGTTTCGT GAACCGGATA TCCTTCTGTT GCGCGACGCG CGTGATCCCC GCCGCCAGGA CCGCTTCTGG CGCGGCGCCG ATCTGGTCGC CGAAGTGGTC AGTGAAGACG ACCCTGAGCG GGATACGCAG ATCAAGCGGA TCGACTACGC CGAAGCTGGC ATTCCTGAGT ACTGGATCGT CAACCCGCTG GATGAAACGG TGACGGTGCT CACCCTGACC GATGGGTCCT ACGTGGAATA TGGCGTCTTC CGGCGGGGCG ACGAAGCGCG CTCGAAACTG CTCGACGGCT TTGCAGTACG CGTCGATGCG ATCTTTGATG CGCAGTAA
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Protein sequence | MTVAAYTPPM RLVIAGEMTD IDLSVIQGMW SVEQYVRLTD HTNRLIEYSD GWIEILPMPT ERHQAILECL FLFFRAYADS HGGKVRFAPL RLLVRDGKFR EPDILLLRDA RDPRRQDRFW RGADLVAEVV SEDDPERDTQ IKRIDYAEAG IPEYWIVNPL DETVTVLTLT DGSYVEYGVF RRGDEARSKL LDGFAVRVDA IFDAQ
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