| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0678 |
|---|
| Symbol | |
|---|
| ID | 5207616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 844156 |
|---|
| End bp | 845688 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594292 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001275045 |
|---|
| Protein GI | 148654840 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases
[COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0623565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0400211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTC GCATTCTGCT TGCCCTGGCG ATCATCCTGC TCGCCGCCCC ATCTGCTCCC
AACGATCCGA GTTTCGACAG GCAGTGGGCG CTGAGAAAAG TCGGCGCACT CTGCGCCTGG
GATCGCACGA CCGGAAGCGC GGAGGTGATT GTCGCCGTTG TGGATAGCGG GGTTGATCCG
ACACACCCCG ATCTGGTGGA TCGACTGCGC ACAGATGGCT ACGATTTTGT CGATAATGAC
AGCGACCCGC GTGATGAACA CGGGCACGGA ACGCACGTCG CGGGTATTGT TGCCGCCGTT
CTCAACAACA ATGAAGGTGT GGCGGGACTG GCGCCAGGGG TGACCATTCT GCCAGTGCGC
GTGATGGATG CACGTGGTCG AGGTTCGGAT CGCGCGATTG CCCGTGGTAT CCGCTTTTCC
GCCGATAAAG GCGCAAAAGT GATCAATCTC AGCCTGGGCG CGACCCTTAC CCTCAACGCC
GATGAACCGT CGGCGCTTGT TAATGACGCC ATCATCTATG CGCAGCAGCA AGGGGCGCTG
GTAGTTGTTG CGGCAGGGAA TGATGCTGTG CCTCTGCCGA ACGCAATTGC GGTCGATAAC
CCGGACGTGC TGGTGGTTGC TGCGACCGAT GAGCGTGACC GCAAGGCGCC CTTCTCCAAC
TCCGGTCCGT GGGTGGCGGT CAGCGCGCCG GGGGTCTATA TCCTCTCCAC CATGCCAACC
TACGAGGTGT TTCTGACCAG CGATCGGTTG CCGCCTGATG AACGTTTTCA GCGTAACTAC
GACTATATGA GCGGCACCTC GCAGGCAACG CCGTATGTGG CGGCGCTGGC GGCGCTCCTC
TTTTCGGCGA ATCCCGATTG GAGCCCAGCG CAGGTTGCCG AAACCATCCG CTCAAACGCT
ACGAACATCC GCGACCTGAA TCCTCGATTT GAACTGGGGA CGGGACGGAT CGATGCCTGC
AAGTCGTTTG GCGGTCCGCC AGCGGAATCC GCGCCGCAGC CAGCGCCATC TCCATCAACG
GTGCGCAGCG AGTCGATCCT TGGTCTTCTG GCGCTCTGCA TATGTGGCAT TGTGCTGGCA
TTGGTGATAA TGACACTCAC GTTTATCCGG GGGGGGCGGC GACGTGCGCC GACTCCTGCT
CCGGTGCCGG CGTCTGTGCC GGTCTATACG CCGCCGCCTG CGCCCACGCC GCCGCAACCC
TACCGACCGC CGCCCGTTGC TGCACCGCAA CCGCCAACCG GCGCCTGGGG AACACTCATG
GTGATCGCGG GCGCTGCGCA ACCGCGCACC TATTCGCTTG CCGGCGCAGA GATGCTGATC
GGGCGCAGCG AAGAGTGTCA GATCGTGCTG ATCGGCGACG GCAGCGTTTC GCGGCGCCAC
GCCATCGTGC GCAACGATGG ACGCCAGGTA ACGGTGGCGG ACGCCGGCAG CAGTCACGGT
ACGTACCTCA ACGGCGTTCG CATCACCCAA CCAACACCGG TGCGTCGCGG TGATGTGCTC
CAGGTTGGTC AGACGCAATT GCGGTTTGGG TGA
|
|---|
| Protein sequence | MSLRILLALA IILLAAPSAP NDPSFDRQWA LRKVGALCAW DRTTGSAEVI VAVVDSGVDP
THPDLVDRLR TDGYDFVDND SDPRDEHGHG THVAGIVAAV LNNNEGVAGL APGVTILPVR
VMDARGRGSD RAIARGIRFS ADKGAKVINL SLGATLTLNA DEPSALVNDA IIYAQQQGAL
VVVAAGNDAV PLPNAIAVDN PDVLVVAATD ERDRKAPFSN SGPWVAVSAP GVYILSTMPT
YEVFLTSDRL PPDERFQRNY DYMSGTSQAT PYVAALAALL FSANPDWSPA QVAETIRSNA
TNIRDLNPRF ELGTGRIDAC KSFGGPPAES APQPAPSPST VRSESILGLL ALCICGIVLA
LVIMTLTFIR GGRRRAPTPA PVPASVPVYT PPPAPTPPQP YRPPPVAAPQ PPTGAWGTLM
VIAGAAQPRT YSLAGAEMLI GRSEECQIVL IGDGSVSRRH AIVRNDGRQV TVADAGSSHG
TYLNGVRITQ PTPVRRGDVL QVGQTQLRFG
|
|---|
| |