| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0663 |
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| Symbol | |
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| ID | 5207601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 828816 |
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| End bp | 829745 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594279 |
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| Product | LmbE family protein |
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| Protein accession | YP_001275032 |
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| Protein GI | 148654827 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000891678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTAC GGGATACTCA TACACTGACT GCCTGGGGTA TTGACTCGCG CTGGTTGCGC
AGCAACGATG CTGATCGGCG TCTGCTCTTC GTCTATGCTC ATCCAGATGA CGAAAGTTTT
GGGAATGCGG GGACGATCCT GCGCTACAGC AGCGATGGCG TGGCCGTCCA CTACGCATGC
GCAACGCGTG GCGAAGCGGG AGATGTTTCG CCCGAACTGC TGGCAGGGTA TGCCGATGTC
GGTGCACTGC GAACCGTGGA GCAGATGCGG GCAGCCGAAG TGCTCGGGCT GACAGGCGTG
CACTTTCTGG GGCACCGCGA CTCGGGCATG CCCGGCTCGC CGGATAACCA GCATCCTGAC
GCGCTTATCC GGCAACCGCC AGCACTCGTC GCAGGGCAGA TCGTTGCCCT GATCCGCGCC
ATACGCCCAC AGGTCGTCGT CACATTCGGA CCGTACGGCG GCTACGGGCA CCCTGATCAC
GTGTTCTGTC ACCAGGTGAC GACGGCGGCA TTCGAAGCGG CTGGCAATCC GACCCTCTAT
CCTGAACAGA TCGCCGATGG TCTGGCGCCG TGGCAACCGC AGCGTCTCTA CTACTCGACG
TTTGGAACCC GCTTTTTATC GACAGTCGTA TTCATGATGC GTCTGCTGGG GAAAGACCCG
AGTCGTTTCG GGCGAAACGG CGATGTCGAT CTGGTCCGTG CTGCGCGTGA AGCGACGCCA
GCAACGACAA AAATCGACAC GGCTGCATAT TTCGAGCAGG CGATCCGGGC GCGGGAATGT
CACCACAGTC AGGGTGGCGG CATCGGCTGG ATCCGTCGCC TGCCGAAACC GCTCCAGCGT
CGCCTCAATG CGGTCGAACG CTTTACCCGC GTCGCGCCGC CCTGGAATGG GGAAGTGATC
GAACGCGATC TGTTCCCTCC CAATCACTGA
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| Protein sequence | MSVRDTHTLT AWGIDSRWLR SNDADRRLLF VYAHPDDESF GNAGTILRYS SDGVAVHYAC
ATRGEAGDVS PELLAGYADV GALRTVEQMR AAEVLGLTGV HFLGHRDSGM PGSPDNQHPD
ALIRQPPALV AGQIVALIRA IRPQVVVTFG PYGGYGHPDH VFCHQVTTAA FEAAGNPTLY
PEQIADGLAP WQPQRLYYST FGTRFLSTVV FMMRLLGKDP SRFGRNGDVD LVRAAREATP
ATTKIDTAAY FEQAIRAREC HHSQGGGIGW IRRLPKPLQR RLNAVERFTR VAPPWNGEVI
ERDLFPPNH
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