| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0631 |
|---|
| Symbol | |
|---|
| ID | 5207569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 783066 |
|---|
| End bp | 783713 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640594250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275003 |
|---|
| Protein GI | 148654798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.290369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCA TTCTGGCACT CTATGCGCTG CCGTATGACC CGCACTATCC GGTAATCTGC
TATGACGAAC GGCCCTGCTT TCTGATCGGC GACACCCTCG TTCCGGCAGC GATGCAGCCA
GGCAAGCCAC GAAAACAGCA CTACGAGTAT GAAAAGCTTG GCTCGTGTGC GCTGCTGGCG
GCAATCGAAC CGCTGACTGG CAAGCGCCTG GCGCAGGTAC ACCCACAGCG CACCAAACGA
GAGTACACGC TGTTTTGCCA AGCACTTGCC GCCCAGTATC CAAACGCGAT CAAGATCCGA
CTGGTACAGG ACAATCTCAA CACCCACAAC GCCAGTGCCT TCTATGAGCA TTTACCGGCT
GAAGATGCGT TTGCCTTAGC AGAGCGTTTC GAGTTCATCT ACACACCCAA GTCGGCCTCC
TGGCTCAATA TGATCGAGTG CGAGTTCGCA GTGATCTCGC GCCTCTGCCT CAACAGGCGC
ATTCCATCGA TCCAGACCTT GGGCCGGGAG GTGTTGGCCT TGTTCAACGA GCGCAGCGCC
AAGGCGATCA AGATCAACTG GCAGTTCTCC ATCCAGGCCG CTCGAACCAA GCTCAATAGC
CACTACACCA AAGTCCATCC CGAGAATGAA AAATACAAGG AAACTTAG
|
|---|
| Protein sequence | MERILALYAL PYDPHYPVIC YDERPCFLIG DTLVPAAMQP GKPRKQHYEY EKLGSCALLA
AIEPLTGKRL AQVHPQRTKR EYTLFCQALA AQYPNAIKIR LVQDNLNTHN ASAFYEHLPA
EDAFALAERF EFIYTPKSAS WLNMIECEFA VISRLCLNRR IPSIQTLGRE VLALFNERSA
KAIKINWQFS IQAARTKLNS HYTKVHPENE KYKET
|
|---|
| |