Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0627 |
Symbol | |
ID | 5207565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 778601 |
End bp | 779401 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594246 |
Product | ABC transporter related |
Protein accession | YP_001274999 |
Protein GI | 148654794 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.157221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCAA TGCTTGCCCT CAACAATGTT GAGGTGATCT ACAACGATGT GGTGCTCGTT CTCAAGGGAC TGTCGCTCGC GGTTCCGGAG GGGCGCATCG TTGCTCTGCT CGGCTCCAAC GGCGCCGGCA AAAGCACGAC GCTCAAGGCG ATCTCCGGTC TGCTGAAGCC GGAGAACGGT GAGGTGACCG ATGGCGAGAT TCGCTTCCTC GGTCAACCGA TCCACAAAAA GGATGCCGCC GAGATTGTGC GCATGGGCAT CTTCCAGGTG CTGGAAGGGC GGCGCGTCTT CGAGCATCTG ACGGTCGAAG AGAATCTGCG CGCGGGAGCA TATACGAGCG GCTGGAAGGG GTTCGATCAG AGCCTGGACA TGGTCTACTC CTACTTTCCG CGCCTGAAAG AGCGCCGCCG CCAGATTTCG GGGTTTCTGA GCGGCGGCGA GCAGCAGATG CTCGCAATTG GACGGGCGCT CATGGCGCAT CCCAGACTGA TCATGCTCGA TGAGCCGTCG CTCGGGCTGG CGCCGCTGCT GGTCGAGGAG ATCTTCCGCA TCATCAGGCA GATCAACCAG GATCGTGGGG TGACCATCCT GCTGGTGGAA CAAAATGCGC GGCTGGCGCT CGAAGCCGCC GACTACGCCT ACATTATGGA GAACGGTCGG ATCGTGCTTG AAGGATCGCC CGCCGATCTG AAGGACAACC CGGACGTGCG CGAGTTCTAT CTGGGACTCA ACGAGGTCGG GCGGCGCAAG AGTTACCGCG AGGTCAAAAC CTACAAACGG CGCAAACGCT GGCTCTCATA A
|
Protein sequence | MQPMLALNNV EVIYNDVVLV LKGLSLAVPE GRIVALLGSN GAGKSTTLKA ISGLLKPENG EVTDGEIRFL GQPIHKKDAA EIVRMGIFQV LEGRRVFEHL TVEENLRAGA YTSGWKGFDQ SLDMVYSYFP RLKERRRQIS GFLSGGEQQM LAIGRALMAH PRLIMLDEPS LGLAPLLVEE IFRIIRQINQ DRGVTILLVE QNARLALEAA DYAYIMENGR IVLEGSPADL KDNPDVREFY LGLNEVGRRK SYREVKTYKR RKRWLS
|
| |