Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0614 |
Symbol | |
ID | 5207552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 762369 |
End bp | 763250 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594233 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001274986 |
Protein GI | 148654781 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.820419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0550538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC GACGGTTCGG CGCGCACATG TCGATCAGTG GCGGGTTACA CACCGCCTGC GAGCGCGGAC GATGCGCGGG GTGCGATGTT GTTCAGATTT TTAGCAAGAA CCAGCAACAG TGGCGCGCCA GACCGCTGAC CGATGAGGAA ATTGCGCGCT TCAAAGAAGC GCAGGTTACC GAAGGCGTTC CGGTGGTTAT GGTACATGAT TCGTATCTGA TCAACCTGGC GGCACCGGGT GATGAGTTGT GGCACAAATC AATTGCGGCG TTCCGCGAGG AACTGGAACG CTGCGCCCTG CTCGGCATCC CCTGCCTGGT CACCCATCCC GGCGCCCATG TTGGTTCCGG CGAAGACGCC GGGTTGCGCC GCGTCGCCGC AGCGCTCGAT CTGGTGTTCG AGACCGGCGT CGGGCGCGAT GTGATCGTGC TGCTGGAAAC GACCGCCGGG CAGGGGAGCA GTCTGGGGCG GCGGTTTGAG GAACTGGCGC GCATTATCGA ATACTCGCGC CACCCGGAAC GTCTCGGCGT CTGTGTCGAT ACCTGCCACA TTTTTGCCGC CGGGTACGAT ATTCGCACGC CTGAGTCCTA CGCGGCGACG ATTGAAGAAC TCGACCGCGT GATCGGTATC GCGCGCGTCA AAGCTTTCCA TCTTAACGAC TCGCAGAAAG AGTTGGGCAG CCGGGTTGAT CGCCATACCC ATATTGGTGA AGGGTGCATC GGGCTGGAAG GGTTTCGCGC GCTGGTGAAC GACGAACGCT TTGCCGGTCT GCCGATGGTG CTGGAAACGC CCAAAGGCGA CGACCTTGCC GATGATGTGC GCAATCTGGC GACGCTGCGC AGTCTATGCA ATGGGCAGTC GGAGCATGAC AACGAAAGGT GA
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Protein sequence | MKQRRFGAHM SISGGLHTAC ERGRCAGCDV VQIFSKNQQQ WRARPLTDEE IARFKEAQVT EGVPVVMVHD SYLINLAAPG DELWHKSIAA FREELERCAL LGIPCLVTHP GAHVGSGEDA GLRRVAAALD LVFETGVGRD VIVLLETTAG QGSSLGRRFE ELARIIEYSR HPERLGVCVD TCHIFAAGYD IRTPESYAAT IEELDRVIGI ARVKAFHLND SQKELGSRVD RHTHIGEGCI GLEGFRALVN DERFAGLPMV LETPKGDDLA DDVRNLATLR SLCNGQSEHD NER
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