| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0609 |
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| Symbol | |
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| ID | 5207547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 757233 |
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| End bp | 758183 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640594228 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001274981 |
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| Protein GI | 148654776 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0104099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCGA TCACCTTCCG CGCCATGGGA TGTCAGATGC ACGCCTTTCT CGACAGTGAG
ACGGATGACG CAACCGCCCT GATCCAATCC GTCCCCCGCT GGTTCGCCGA ATGGGAGCGC
ATCCTGAGTC GCTTCCGCAC CGACAGCGAG TTGTCGGCGC TCAACCGGCA GGCAGGCAAA
GGTTGGGTGC GCGTCAGTCC GACGCTGTGG GAAGTGGTGA ACGATGCGCT GGTTGCCGCG
CGCATGAGCG ATGGTCTGGT CACTCCGACC GTACTCCCGG TCATGGAAAT GGTCGGATAC
GACCGCGACT TTGCGCAGGT GAAGAATGGC GAGTTGGTCG CTGCTCCAGT TGCCGCCCCG
CCCCCCGGCG ACTGGCGCGC CATTCGCCTC GATCCCGGAC GACGCGCCGT GATGCTGCCG
CCGGGGATGC GTCTCGATCT GGGGGGCATT GCCAAGGGGT GGGCGGCTGA GCGGGCGGCG
CGACAACTGG CGCGGTACGG ACCGGCGCTC GTCGACGCTG GCGGCGATAT TGCGGTGCGC
GGCGCGCGCG TCGGCGGCGA ACCGTGGATG GTTGGGGTTG ACGATCCGTT GCATCCCGGC
GAACATCTCG CCATCCTGCT GCTGAGCAGT GGCGGCGTTG CGACGTCGGG ACGCGATCTG
CGGCGCTGGC GCCAGGGAGA TGTCGAGCGC CACCATATCA TCGACCCGCG TACCGGCGCA
CCAGCGCAGA CCGATATTCT TGCCGCAACC GTGGTTGCGC CCTCACTGCA CGAAGCGGAA
GTCGCCGCGA AAGTGGTCAT GATCCTGGGG CGCCTGGCGG GAATGCAGTG GTTGAACGCC
CGCCCGTGGC TCGCCGGTCT TCTCGTAACC GAAACGAATG ACATCCTGCA CACAGCGACG
CTCGACCGGT ATCGCTGGCG CGAGCGAGTT CTGGAGGTTT CACATGAGTG A
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| Protein sequence | MQSITFRAMG CQMHAFLDSE TDDATALIQS VPRWFAEWER ILSRFRTDSE LSALNRQAGK
GWVRVSPTLW EVVNDALVAA RMSDGLVTPT VLPVMEMVGY DRDFAQVKNG ELVAAPVAAP
PPGDWRAIRL DPGRRAVMLP PGMRLDLGGI AKGWAAERAA RQLARYGPAL VDAGGDIAVR
GARVGGEPWM VGVDDPLHPG EHLAILLLSS GGVATSGRDL RRWRQGDVER HHIIDPRTGA
PAQTDILAAT VVAPSLHEAE VAAKVVMILG RLAGMQWLNA RPWLAGLLVT ETNDILHTAT
LDRYRWRERV LEVSHE
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