Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0596 |
Symbol | |
ID | 5207534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 743964 |
End bp | 745370 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640594215 |
Product | hypothetical protein |
Protein accession | YP_001274968 |
Protein GI | 148654763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0539689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000913537 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTATCCGG TATGGGAAGG TCTCTTCATT CATTCGGCGA TGTTCGTCGC TATCGTGTCC GCCTTCCACG TCCTTGCCTC GCACCTGACG GTTGCGGCAG CATGGTTCAA CCTGTACCTG GAACGGCGCG CAGTGTACGA GAATCGCCCG GAACTGTACG TCTACCTCAA ACGGAGCGCC CTGGGGTTGC TGGTGTTTGC CTATGTCTTC GGCGCTATGG CAGGCGTGGG GATCTGGCAA ACGACAACCG CTGCCAACCC GCGCGGCATC TCTACCCTCA TCCACAACTT TGTGCTCTAC TGGGGTTCGG AATGGTACAT GTTCCTGATC GATGTCGTGG GGATTATCGC CTACTACTAC ACCTTCGAGC GGGTCAGCCC GCGCACGCAC CTGCGGCTGG CGTGGATACT GGCGTTGGGA GGCACCGGCA CCCTGGCGAT CATCGTCGGC ATTCTGTCGT TCAAGTTGAC GCCAGGTCTC TGGTTTACGA CTGGTGAGAG TCTGAACGGT TTCTTCAATC CCACCTTCTG GCCGCAACTG TTCATGCGGT TTGCCCTGAT GTTCACCATC ACTGCAGCCT GGGCGCTGCT GATCGTCACG GGCTTGCCGA AGGGGTATTT CGCACGTGAG CGGATCATTC GTATAGCGGC AGTGATGGGG CTTGGCGGGC TGGTTGTTGC TCTTGGCATC TGGTTCTTCT GGTACTACCC CGCGCTGCCG GATCACGCAA AGACTATTCT GCGCTCTCCG GCTATCCCTC CTGTTACATT TACGATCATT ATTGGCGGCC TGATTGCGAC GTTTCTGGGG TTGCTGTTTG CGCTGGCGAT GCCGCGTCGT CAGCATCAGA TCATTGCGTT GGGAGCGATG CTGGTGCTGT TTGCCGCCAT TTTTGGCGCG GAACGCACCC GTGAGGTCAT TCGCAAGCCG GATATTATTG CCGGCTATAT GTCCTCGAAT CAACTGGTCT TCAACGACAT TCCTGCGCGT GGCGTCCAGC GTGAGGAGCA ACAGTTGAAC GAGACCGGCA TGCTCGGTTC ACTGCCATTC CTGCCGCGTC CAGAGATGAT TTCGGTTGGA GCGCCCGCCG GTTTTCCCAA CCATCAGGTT GCGATGGGGC GGGTCCTGGT CATTCAGCAG TGCGCGGCAT GCCACAATGT GAGCAATCAG ACGGCGATCA CCGTTTTTGA TCAGCGCCTG GCGCTGCGTT CACTGGCGCA GTTGCTGGAG CGGCGCAAGA TGACGACCGC GCCGAAAATC GAGACATACC TGAAGGGCAT TGGCGCCTTC CCCTACATGC ACCCGTTCGT CGGTACACCT GAAGAGCGGG CGGCAATGGC GCTGTATCTG GAATACTTCA TTCAACAACA GCATGCGCCA CAACCACAGG CGCAAGCCAG GAGGTGA
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Protein sequence | MYPVWEGLFI HSAMFVAIVS AFHVLASHLT VAAAWFNLYL ERRAVYENRP ELYVYLKRSA LGLLVFAYVF GAMAGVGIWQ TTTAANPRGI STLIHNFVLY WGSEWYMFLI DVVGIIAYYY TFERVSPRTH LRLAWILALG GTGTLAIIVG ILSFKLTPGL WFTTGESLNG FFNPTFWPQL FMRFALMFTI TAAWALLIVT GLPKGYFARE RIIRIAAVMG LGGLVVALGI WFFWYYPALP DHAKTILRSP AIPPVTFTII IGGLIATFLG LLFALAMPRR QHQIIALGAM LVLFAAIFGA ERTREVIRKP DIIAGYMSSN QLVFNDIPAR GVQREEQQLN ETGMLGSLPF LPRPEMISVG APAGFPNHQV AMGRVLVIQQ CAACHNVSNQ TAITVFDQRL ALRSLAQLLE RRKMTTAPKI ETYLKGIGAF PYMHPFVGTP EERAAMALYL EYFIQQQHAP QPQAQARR
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