Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0580 |
Symbol | |
ID | 5207518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 718738 |
End bp | 719865 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594199 |
Product | glycosyl transferase family protein |
Protein accession | YP_001274952 |
Protein GI | 148654747 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.40168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCC TGACCGTGGC AGCGCTGATA AGCGCCTTTG TAATCGCTTT CGTCGTGACT GCGCTGACCG TTCCGCCGGT CATCCGGCTG TGCGAGCGAC GCGGGTGGGT GCAGCATCCC GGTGGACGTC GTTCCCACGT GCGACCGACT CCCAATGTCG GCGGCATTGC GATCTACGCT GGCTTCGTGA CTTCACTGCT CGCAACGTTC ATATTCACCT CCGCCGAGCC GTCGTTGCAA CGTTCAGAAT TCGAGGTTTT GCGTATTGGG CTGCTGTTGC TTGGCGGGAC GGCAATCTTC CTGGTTATGT GGGTGGACGA TGTGGTTGAA CTCTCGTGGC TCCCCAAGTT TGCGGCGCAA GCCGGTGCAG GGCTGATTGC GGTCGGTCCG TACCTCTGGG ATCAGCGACG CTACCCTGAT GCGCTGGGCT TGCCAACCGA AGCGCGCGGC ATTTTGTTGA CCGCCTTCAA TGTGCCGTTC ATCGGGCAGG TCAGCCTGTG GGATGCCAGC CCGTGGCTGG CAATCGCGGC GACGGTGTTC TGGTTGGGGT GGATGGCGAA TACGATCAAC TGGTCGGACG GGCTTGACGG GCTTGCGGCA GGGGTGTCGT TGATCGCAGC ATTGATGCTG GCGCTGCACG CGCTGCGCCT CGATCCGCCG CAGCGAACGG TTGCGCTCGT GCCCCTTGCG CTCGCCGGGG CGTGCGCCGG ATTTCTGATC TTCAATCTGC CGCCGGCGCG TATTTTTATG GGTGATAGCG GTGCAGAGTT TCTCGGTTTT CTGCTGGGCG TCAGTGCGAT CATCGGCGGA GCGAAACTGG CGACGGTGCT GCTGGTGCTG GGTGTGCCGA TCCTCGATGT CGCCTGGCTG ATCGTGGCGC GCACTGCATC TGGCAGGCAA CCTGCGCAGG GTGGGCGTGA TCATCTTCAC CATCGCCTGC TCGATAGCGG CATGTCAGCA CGCCAGATCC TGGCACTCTA CTGGGGATTG AGCGCCAGTT TCGGGTTGCT CGGAATCGCC GACATCAGCC CATCCGCCAA ACTGATCGGT CTGGCGCTGC TGTTGCTGAT CGGCGCCGGA TTGATCGTCT ACGCCACGCG TCGCGTTCCT GCGCGTTCGC CGCAGTGA
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Protein sequence | MSLLTVAALI SAFVIAFVVT ALTVPPVIRL CERRGWVQHP GGRRSHVRPT PNVGGIAIYA GFVTSLLATF IFTSAEPSLQ RSEFEVLRIG LLLLGGTAIF LVMWVDDVVE LSWLPKFAAQ AGAGLIAVGP YLWDQRRYPD ALGLPTEARG ILLTAFNVPF IGQVSLWDAS PWLAIAATVF WLGWMANTIN WSDGLDGLAA GVSLIAALML ALHALRLDPP QRTVALVPLA LAGACAGFLI FNLPPARIFM GDSGAEFLGF LLGVSAIIGG AKLATVLLVL GVPILDVAWL IVARTASGRQ PAQGGRDHLH HRLLDSGMSA RQILALYWGL SASFGLLGIA DISPSAKLIG LALLLLIGAG LIVYATRRVP ARSPQ
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