Gene RoseRS_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0548 
Symbol 
ID5207486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp685194 
End bp685538 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content53% 
IMG OID640594167 
Producthypothetical protein 
Protein accessionYP_001274920 
Protein GI148654715 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.97195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTG ACCCGCGACT GTACCTGGAT GACATTCGCG AATCCTGCGA AAAGATCGTG 
CGCTATTCCC AGGGGTTGGA CCTGAACCAG TTTGTGCAGG ACGAAAAGAC CTTCGATGCC
ATTGTACGCA ATCTGGAGAT CATCGGAGAA GCAGCGAAGC GCATTCCGCC CCAGATGCGA
GCACGCTATC CCGATGTAGA ATGGAATAAG ATCGCTGGCT TGCGCGACAT CGTAGCCCAC
GAATATTTTG GTCTGGACGA AGATATCTTG TGGGATGTAG TTCAGAATCG GATTCCTGTA
CTTCTTGATC GGACCCGGCA GATTCTGGCT GCGGAAGGCG GATGA
 
Protein sequence
MSRDPRLYLD DIRESCEKIV RYSQGLDLNQ FVQDEKTFDA IVRNLEIIGE AAKRIPPQMR 
ARYPDVEWNK IAGLRDIVAH EYFGLDEDIL WDVVQNRIPV LLDRTRQILA AEGG