| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0544 |
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| Symbol | |
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| ID | 5207482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 678925 |
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| End bp | 681096 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594163 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001274916 |
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| Protein GI | 148654711 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG AGGCGCAGAC GACAGCGGCT GGCGATACGG CGGTACACCC CCTGTTCGAC
ATGTTCCCTC CTGCGACCTA CGAGGAGTGG CGCGCTGTGG CGGAAAAGAC GCTCAAAGGT
GCGCCATTCG AGAAACGGTT GATCACCAAA ACGTATGAGA ACATCCTGCT GCAACCGATC
TACAACATCG AGGACATTGC GGGTCTGCCG CAGGTCAACT CGCTGCCGGG ATTTGAGCCG
TTTGTGCGAA GTACTCGGGC GCTTGGCTAT GTCATCGCGC GCTGGGAGGT GTGCCAGGAA
CTGCCCTACC CCCTGCCGCG CGAGGTCAAT GAGGCGGCGC GCAGCGATCT GTCCCGTGGA
CTGACGTCAC TCAACCTGCC GCTTGATCAG GCGACCCTGC AAGGACTCGA TCCTGATGCC
GCTCCGATGG CGCTGGTCGG TGCGGGTGGC GTGTCGCTGG CGACGGTGGA CGATGCGGTG
ACGCTGCTGG AGGGCGTGAC GCTGGATCGA ACGCCGCTGC TGGTGGCAGC CGGTGCGAAC
GCAGTGCCGG TTGCGGCGCT GATCCTGGCT GCTGCCGAGC GCTCCGGTGT GGGATTCGAC
CGGATCGGCG GGTGTATTGG TGCCGATCCA CTCGGTGCGC TGGCGGTGCA GGGGTCGTTG
CCGCTCTCGC TGGAGCGCAG TTACGACCTG ATGGCGCAGT GGACAGCCTG GGCGCATGTC
CACGCGCCGC TCCTGCGCAC CATCCTGGTT GCGACGCACG TCTATCACAA CGGTGGCGCC
TCGGTTGTGC AGGACCTGGC GTGCGCTCTG GCAACCGGTG TGGCATACAT TCGCGCGATG
CAGGCGCGTG GTCTGGATGT GCATGTCGTC GCGCCACGGA TGCAGTTCGC CTTCTCGATC
GGGTCGCAGT TCTTTATGGA GATCGCGCGT CTCCGCGCTG CGCGTATGCT GTGGGCGCGG
GTGGTTTCCG CCTTCGGCGG CGACGAGCAG GCGCAAAAGA TGCGCATCCA CGGTCGAACG
TCGGCATGGA CAAAGGCGCG CTTCGATGCC TATAATAACA TGTTGCGCGC AACCGGTGAG
GCGATGGCGG GAGTGATGGG CGGCATCGAT AGTTTGCACG TCAGTCACTT CGATGAGGCG
CTTGGGTTGC CCGATGAGTT CTCACGTCGC ATTGCGCGCA ATGTGCAGAT TATTCTCCAG
GAGGAGTGCA ATTTCATTCG CGTGATCGAT CCGCCCGGCG GCGCTTGGGC AATTGAGACG
CTGACCGATC AGGTGGCGCA GAAGGCGTGG GCGCTGTTCC AGGAGATCGA GCGCAAGGGA
GGGATGGCTG ACGCGCTGGT CGCAGGTTTC CCTCAGTCGT TCGTCGCTGC GACGCGCGCT
GAACGCTTCT CCGCAATTGC CCACCGCCGT GAGGTGATCG TTGGTGTGAA TATGTACCCG
AACCTGAAGG AGAAACCACT GACGGTGCGA ATGGTGGATC ACGCGGCGGT TCAGGCAGAA
CGCTCTGCCG AAGTGCAGCG CGTTCGTCAC GCGGTCGATC CACAGGCGCG TCAGGATGCG
CTGGGCGCGC TGACCCAGAC GCTTGCCGCT GCGCCGGATC GTCTGGTTGA ACGGGCAATC
GCCGCAGCGC GCATCGGTGC GACCCTTGGC GATCTTGCGA CCGCCCTGGC TTCCAGTGAT
GCCGCCGGTC CAACCATCGA ACCGATCCCG TTCCACCGCG CTGCGGAGCA GTTCGAGACG
CTGCGGACCA CGGCAGAGGC ATACATGGCG CGTACCGGCG CACGTCCGAA GGTCTTCCTT
GCCAATATGG GACCGATACC GCAGCACAAA GCGCGCGCCG ATTTCTCAAC CGGCTTCTTC
GAGGCGGGCG GCTTCGAGGT GATTGGCAAC AGCGGGTTCG CCACCGTCGA AGAAGCGGCG
CAGGCGGCGC TCGAATCAGG CGCAGGGATT GTGACGATCT GCTCTACCGA CGAGACCTAC
CCGGAGATCG TTCCGGCATT GACCGGTCTG ATCAAATCGA GCCGTCCCGA TGTGACCGTT
GTGCTGGCAG GCTATCCGAC CGATCAGATC GAGACCTATC GAGCTGCCGG GGTTGATGAG
TTCATCCATT TGCGCGCGAA TTGTTACGAG ACCCTGGTGC GGTTGCAACA GTTGAAAGGA
GTTGCTGCGT GA
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| Protein sequence | MSEEAQTTAA GDTAVHPLFD MFPPATYEEW RAVAEKTLKG APFEKRLITK TYENILLQPI
YNIEDIAGLP QVNSLPGFEP FVRSTRALGY VIARWEVCQE LPYPLPREVN EAARSDLSRG
LTSLNLPLDQ ATLQGLDPDA APMALVGAGG VSLATVDDAV TLLEGVTLDR TPLLVAAGAN
AVPVAALILA AAERSGVGFD RIGGCIGADP LGALAVQGSL PLSLERSYDL MAQWTAWAHV
HAPLLRTILV ATHVYHNGGA SVVQDLACAL ATGVAYIRAM QARGLDVHVV APRMQFAFSI
GSQFFMEIAR LRAARMLWAR VVSAFGGDEQ AQKMRIHGRT SAWTKARFDA YNNMLRATGE
AMAGVMGGID SLHVSHFDEA LGLPDEFSRR IARNVQIILQ EECNFIRVID PPGGAWAIET
LTDQVAQKAW ALFQEIERKG GMADALVAGF PQSFVAATRA ERFSAIAHRR EVIVGVNMYP
NLKEKPLTVR MVDHAAVQAE RSAEVQRVRH AVDPQARQDA LGALTQTLAA APDRLVERAI
AAARIGATLG DLATALASSD AAGPTIEPIP FHRAAEQFET LRTTAEAYMA RTGARPKVFL
ANMGPIPQHK ARADFSTGFF EAGGFEVIGN SGFATVEEAA QAALESGAGI VTICSTDETY
PEIVPALTGL IKSSRPDVTV VLAGYPTDQI ETYRAAGVDE FIHLRANCYE TLVRLQQLKG
VAA
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