| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0542 |
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| Symbol | |
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| ID | 5207479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 677275 |
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| End bp | 678069 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594160 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001274914 |
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| Protein GI | 148654709 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.67622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGCTG GCGCATGTGT TGATCCATTT GTTTCCTTGC GGACGACAGG AGACGCGAGA
CATACCATGA GCCTTCACGG CAAAGCAGCG CTGGTTACCG GTGGTGCGCG ACGACTGGGG
CGGGCGATTG CGCTGGCCCT CGGACGCGCT GGTATGCGTG TTGCGATTCA TTATCACGCA
TCCGCAGCGT CAGCGGAAGA AGTGATATCA GAAATGCGCA CGTATGGCGT GGAGTGCATC
GCCATTCCCG GCGACTTAAG CCGGGTCGCC GACTGCGAGC GCGTGGTGGA TGCAACGCTG
GAACAGTGGG GCAGGCTTGA TCTTCTGGTG AACAACGCTG GCATCTGGGG ATCAACGCCG
GTTGGGAGCG TGACGGAAGA ACGTTGGGAT GAGTTGCTGA ACACGAACCT GCGCAGCATG
TTTTTCGTCG CGCAACGCGC TGCTGATGCC CTGCGCGCAT CGCACGGCGT AATCATCAAC
ATCGCCGACG TGGGCGTTGA ACGACCGTGG CGCAACCACA CACCATACCT GATTAGCAAA
GGTGGTGTGG TGACGCTCAC CAGAGCGCTG GCAAAAGACC TGGCGCCGGA AATTCGGGTC
AACGCGATTG CGCCGGGTCC AGTCCTGCTT CCTGACGATT GGGGCGCTGA ACAGGCGGAA
CGGGTCGCGC GCACCACCCT GCTGCGGCGC ATCGGTAGCC CTGAGGATAT TGCCGATGCG
GTGATCTTCC TGGCACAGGC CGGGTATATA ACCGGTGTGA CGCTCCCGGT TGATGGGGGA
CATCTTTTGC ACTAA
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| Protein sequence | MGAGACVDPF VSLRTTGDAR HTMSLHGKAA LVTGGARRLG RAIALALGRA GMRVAIHYHA
SAASAEEVIS EMRTYGVECI AIPGDLSRVA DCERVVDATL EQWGRLDLLV NNAGIWGSTP
VGSVTEERWD ELLNTNLRSM FFVAQRAADA LRASHGVIIN IADVGVERPW RNHTPYLISK
GGVVTLTRAL AKDLAPEIRV NAIAPGPVLL PDDWGAEQAE RVARTTLLRR IGSPEDIADA
VIFLAQAGYI TGVTLPVDGG HLLH
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