Gene RoseRS_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0518 
Symbol 
ID5207455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp651142 
End bp652116 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID640594138 
ProductATP synthase F0, A subunit 
Protein accessionYP_001274892 
Protein GI148654687 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.645048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACC GCATTCTGAC GGTCACTGGC ATCCTGCTCG TGCTGGGGAT CGTCCTGTAT 
ATCATCGGCG TTCGCTCGAC CAAACTGCAC ATCTCTGTCG CCGCTGAACC GGTCGTTTGT
CTCGGCGGCG TGCGCGCAAC CCTCGAAACG TGCGCAAGTG GATTTCCCAT CACCAACTCG
TTGATCACGA CCGTTATCGT TCTACTCATT TTCTTTATCG TCATCCTGGC TGGCACGCGC
AACATGCAGG TCGTCCCGCG CGGTTTCCAG AATACGCTGG AAGTGCTGGT CGAAGCGTTC
TACAACTTTG CTCAGGGCGT TGATCGCAAG AATGTTGCGA AGTTTTTCCC CTTCTGCGCT
TCAGCATTCT TCTTTATGCT GGTTTCCAAT ATTACCGGAT TGATTCCGGG CGTTGGCAGC
ATCGGCGTGT GTGTGCCAAC TGCTAAGGAA GCGGCGATTG TTGCGCCGAT CACCGATGTC
ACGATGGCTG AAGAGCCAGC TGGCGCAGCG GATTTCTTTG CATCGTGGCC CCTGGCATGC
GAGAAAGGAA CCACCCTGGT GCCTTTTCTG CGCGCGCCAA CCGCCGATCT GAATATGACA
CTGGCGTGGG CGCTGGCGTC GGTGGCGCTT ATTCAGTTCT TCGGTTTTCA GGCGCTTGGC
ATCGGGTATT TGACGAAGTT CTTCAATTTC CGCGAAGGCT TTATGATGGC GTTGGTCGGC
ATTCTCGAGT TGATCTCCGA GTTTGTGCGC ATTATCGCTT TCGCCTTCCG TCTTTTCGGC
AATATCTTCG CTGGCGAGGT CATTCTCGTT GTTATGGCGT TTCTGTTCCC ATATCTGCTG
CCCGCGCCGT TTTACGCCTT TGAACTGTTC GTTGCATTCA TTCAGGCGCT GATTTTTGCG
GTGTTGTCGC TTGTGTTTAT GTCGCTGGCG ACAGAAGCGC ACGGCGGGCA CCACAGCGAA
ACATCGGCAC ATTAG
 
Protein sequence
MRNRILTVTG ILLVLGIVLY IIGVRSTKLH ISVAAEPVVC LGGVRATLET CASGFPITNS 
LITTVIVLLI FFIVILAGTR NMQVVPRGFQ NTLEVLVEAF YNFAQGVDRK NVAKFFPFCA
SAFFFMLVSN ITGLIPGVGS IGVCVPTAKE AAIVAPITDV TMAEEPAGAA DFFASWPLAC
EKGTTLVPFL RAPTADLNMT LAWALASVAL IQFFGFQALG IGYLTKFFNF REGFMMALVG
ILELISEFVR IIAFAFRLFG NIFAGEVILV VMAFLFPYLL PAPFYAFELF VAFIQALIFA
VLSLVFMSLA TEAHGGHHSE TSAH