Gene RoseRS_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0517 
Symbol 
ID5207454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp650825 
End bp651058 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content60% 
IMG OID640594137 
ProductATP synthase F0, C subunit 
Protein accessionYP_001274891 
Protein GI148654686 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.959097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.580721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG AAGGTCTGCG ACTTATCGCT GCGGCGCTGG CGGTGGGCCT TGGCGCCATC 
GGGCCTGGCG TTGGCATCGG CGTTATCTTC AGCGGCGCGC TGCAAGCGAT GGGCCGCAAC
CCTGAAGCTG AAGGAACCCT GCGCACCTAT ATGTTCCTCG GCTTTGCGCT GGTCGAAGCG
TTGTTCATCT TCGCACTGGT GATCTCGCTG TTGATCGCAT TCCGAATCGT GTAG
 
Protein sequence
MSDEGLRLIA AALAVGLGAI GPGVGIGVIF SGALQAMGRN PEAEGTLRTY MFLGFALVEA 
LFIFALVISL LIAFRIV