Gene RoseRS_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0512 
Symbol 
ID5207449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp645804 
End bp647219 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content61% 
IMG OID640594132 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001274886 
Protein GI148654681 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.399895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAG CAACCGGTGT CGTGACTGAT ATTATCGGTG TGGTGCTCAA CGCGAAGTTC 
CCGGAGGATC AGACGCCGGA AATCTACAAT GCGCTGGAAA TTCGGCTTGA AAATGGCAAG
CGCCTGGTTG CCGAGGTGCA GCAGCAACTC GGCGGCGGCG TGGTCAAAGC CGTGGCGATG
AGCAGCACCG ATGGCATGCG CCGAGGCGTC AAGGCGATTG ATACCGGTCG CCCGATTGCG
GTGCCGGTCG GACCAGGAAC GCTTGGGCGC GTGTTCGATG TGCTCGGCGA CCCGATCGAT
GGCGAGGGTC CGGTGCAGGC GACCGAATAT CGCCCGATCC ATCGTCCGCC CCCCGCCCTC
GAGGATCAAT CGACGACGGC ACAGATTTTT GAAACCGGCA TCAAGGTTAT CGACCTGATT
GCGCCGTTTA CGCGCGGCGG CAAAACCGGC ATCTTCGGCG GCGCCGGCGT CGGCAAGACC
GTCGTGATCC AGGAATTGAT CGCCAACGTC GCCAAGGAAC AGTCGGGCTT CTCGGTTTTC
GCTGGCGTCG GCGAACGTTC GCGCGAGGGA AATGACCTCA TCCACGAAAT GAAGGAAGCC
CGGATCGATG AACAGACCCG CGTCTTCGAC AAGACGGTGA TGGTGTTTGG CCAGATGAAC
GAGCCGCCGG GCGCACGTCT GCGTGTGGCG CTGACCGCCA TGACGATGGC GGAATATTTC
CGCGACGAAG GGCGCGACGT GCTGCTCTTC ATCGATAATA TCTTCCGCTT CGTTCAGGCA
GGCTCCGAAG TCTCGGCGCT GCTGGGGCGC ATGCCGTCAC AGGTGGGATA CCAGCCGACC
CTCGGCACCG AAATGGGTGA ATTGCAGGAA CGCATCACCT CGACCAAAAA GGGGTCGATC
ACATCGATGC AGGCGGTCTA CGTACCCGCC GACGACTACA CCGACCCGGC GCCGGCAACG
GTCTTCTCGC ACCTTGACGC GACGATCACC CTCGAACGCA GCATTGCCGC GAAGGGCATC
TACCCGGCGG TCGATCCGCT GGCATCGACC AGTCGCATTC TCGACCCCAA CATCGTCGGC
GCAGAGCATT ACCGCGTTGC GCGCGAGGTG CAGCGGGTGC TTCAGCGCTA CAAAGATTTG
CAGGACATCA TTGCTATCCT GGGCGTTGAG GAACTTTCGG ATGACGACAA ACTGACGGTG
GCGCGCGCGC GCAAGATCGA GCGCTTCTTC TCGCAACCGT TCACCGTTGC GCAGCAGTTC
ACCGGGCGCC CTGGCAAGTA TGTGCCGATT GCGGAAACGG TGAAGAGTTT TGCGCGCCTG
CTGGCAGGCG AAGTCGATCA TATTCCTGAG CAGTTCTTCC TGCTTCAGGG CGGACTCGAT
GATGTCATCC AGGCGTATGA GGCGTCACGG AGGTAA
 
Protein sequence
MAGATGVVTD IIGVVLNAKF PEDQTPEIYN ALEIRLENGK RLVAEVQQQL GGGVVKAVAM 
SSTDGMRRGV KAIDTGRPIA VPVGPGTLGR VFDVLGDPID GEGPVQATEY RPIHRPPPAL
EDQSTTAQIF ETGIKVIDLI APFTRGGKTG IFGGAGVGKT VVIQELIANV AKEQSGFSVF
AGVGERSREG NDLIHEMKEA RIDEQTRVFD KTVMVFGQMN EPPGARLRVA LTAMTMAEYF
RDEGRDVLLF IDNIFRFVQA GSEVSALLGR MPSQVGYQPT LGTEMGELQE RITSTKKGSI
TSMQAVYVPA DDYTDPAPAT VFSHLDATIT LERSIAAKGI YPAVDPLAST SRILDPNIVG
AEHYRVAREV QRVLQRYKDL QDIIAILGVE ELSDDDKLTV ARARKIERFF SQPFTVAQQF
TGRPGKYVPI AETVKSFARL LAGEVDHIPE QFFLLQGGLD DVIQAYEASR R