Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0508 |
Symbol | |
ID | 5207445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 642870 |
End bp | 643352 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594128 |
Product | hypothetical protein |
Protein accession | YP_001274882 |
Protein GI | 148654677 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3557] Uncharacterized domain/protein associated with RNAses G and E |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCGC CACGCTCGAT TACGGTCAAA CTTGTCAAAC CGGAAAAGAA CCAGGTAGTG ACCTACTGCG CCAGGGTGAT CCGCGCAACG CCGGAGTATG CGCTGGTGCG CGCTGTGTGG GATCATCCGC GACTCGACCT GGGATATGTG ACATTCGAGC CGGGGGACGT CTTCTTCGAG CACTTCTATG CTGATCGCTG GTACAATGTG TTCGAACTGC GCAGCGCGAC CGGTATGCTC AAAGGATGGT ACTGCAACGT CACGCGCCCG GCGATCATCA GCAGTGAGAC GATCATTTCC GAAGACCTCG ATCTCGATCT GTTCGTGTCG GCGGAGCGTG ATCGTGTGAT GCGACTCGAT GTGGAAGAGT TCGAGGCGCG CGGACTGGCG CAGCGCGACC CGCACGTCTA TGCTGCTGCA TGCGCCGCGC TGGAAGAACT GGAGCGACTT GCCGGCGCAG GCGCGCCCCC CTTTTGCGTA TGA
|
Protein sequence | MSSPRSITVK LVKPEKNQVV TYCARVIRAT PEYALVRAVW DHPRLDLGYV TFEPGDVFFE HFYADRWYNV FELRSATGML KGWYCNVTRP AIISSETIIS EDLDLDLFVS AERDRVMRLD VEEFEARGLA QRDPHVYAAA CAALEELERL AGAGAPPFCV
|
| |