Gene RoseRS_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0508 
Symbol 
ID5207445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp642870 
End bp643352 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640594128 
Producthypothetical protein 
Protein accessionYP_001274882 
Protein GI148654677 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3557] Uncharacterized domain/protein associated with RNAses G and E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGC CACGCTCGAT TACGGTCAAA CTTGTCAAAC CGGAAAAGAA CCAGGTAGTG 
ACCTACTGCG CCAGGGTGAT CCGCGCAACG CCGGAGTATG CGCTGGTGCG CGCTGTGTGG
GATCATCCGC GACTCGACCT GGGATATGTG ACATTCGAGC CGGGGGACGT CTTCTTCGAG
CACTTCTATG CTGATCGCTG GTACAATGTG TTCGAACTGC GCAGCGCGAC CGGTATGCTC
AAAGGATGGT ACTGCAACGT CACGCGCCCG GCGATCATCA GCAGTGAGAC GATCATTTCC
GAAGACCTCG ATCTCGATCT GTTCGTGTCG GCGGAGCGTG ATCGTGTGAT GCGACTCGAT
GTGGAAGAGT TCGAGGCGCG CGGACTGGCG CAGCGCGACC CGCACGTCTA TGCTGCTGCA
TGCGCCGCGC TGGAAGAACT GGAGCGACTT GCCGGCGCAG GCGCGCCCCC CTTTTGCGTA
TGA
 
Protein sequence
MSSPRSITVK LVKPEKNQVV TYCARVIRAT PEYALVRAVW DHPRLDLGYV TFEPGDVFFE 
HFYADRWYNV FELRSATGML KGWYCNVTRP AIISSETIIS EDLDLDLFVS AERDRVMRLD
VEEFEARGLA QRDPHVYAAA CAALEELERL AGAGAPPFCV