Gene RoseRS_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0470 
Symbol 
ID5207406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp597504 
End bp599183 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content54% 
IMG OID640594090 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_001274845 
Protein GI148654640 
COG category[S] Function unknown 
COG ID[COG3379] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000156785 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00144539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAGAA TGGAAAAGCA TATGTATCGC ATTCTTGTTA TTGGACTCGA CGCAGCAGGG 
CTGGATCTGA TTGAGCCATG GATAGCTGCG GGGTATCTGC CTCATATTGC GCATATCCTT
CGCACCGGTG CGTATGCGCC AATGCGTTCC ACTATTCCAG TTATGTCGCC GCCAGCATGG
ACGTCTCTGA TCACTGGCTT GAATCCCGGA AAGCATGGCG TCTACGATTT TGTGCGTCTA
TTGCCTGGAA GTTATCGGCT ATATAGTACC CGGCGCGATC AAACAACATA CCGGACCATC
TTCGATCATG CCAGTGCTTA TGGTCGCTAT GTTCTTGCAG TTAATATTCC TATCACCTAC
CCACCGGCGC CGGTGCGCGG GATCATGATT TCTGGTCTTG GTGCGCCACG TCAGGGGCGT
TTCGCGCATC CAGGCGAGTT GGAAAAAGAA CTTCACGTAT GGGAATATCG CCGCGATATA
GATGTTGTCT TTGCTCCTGG TAAAGAGCAG GAATGGATTG CTGATCTTCA GAATGTGACC
CGCTCGCAAA CCGATGCTAT GCTGCGGTTG CTCAAGCGTG AGCCATGGGA TCTTGCGATG
CTGGTCTATC GAGCAATTGA TGAGGTGGAG ACGTATTTCT GGCATCATAT GGATCCCACC
CATCCGCAGC ACGATCCTGA GAAGGCGAAG ATGTACGGAT CGGCAATTCT TAAAGTTCAT
CGGTTGCTGG ACGAAGAGAT TGGGCGGCTG CTGGAGGTAG TCGGTGATGA TACGATCATT
GTGCTTGCAT CGGATCATGG CGGCGGTCCA GTGTATAAGG AAGTCTTTCT CAATGTCTGG
CTCGAACAAC AGGGATGGTT AGTGCGACGG CGCACGCATC CTCTGAATGA GTGGCGTAAG
AATGTCATGC GTCGCCTTCA CCTGACCAGC GATCATCTGG CGCCGATGCT TGATTTCCCG
CTGGCATGGC GGATTCGTAA TCTTATACCT CAACGCCTGC AGCATGCGTT GGTGCCCGAA
TCGTCGGTGA CACTGGCAGA CGTGGTTGAC TGGTCGCGAA CGCGAGCCTA CAGTTTTGGC
AATATTGGTC AGATATATGT CAATCTGCGC GGACGTGAGC CACAAGGCAT CGTCGAACCA
GGCGCCGAGT ATGAACGGTT GCTGGACGAG ATAACGGAGG CGCTATATGC GCTCACTGAC
GAGGGGCAGC CTGTTGTAGA CGCCGTATAT CGAGGGCGCG ATCTCTACAC CGGTCCGTAT
GCTGGTTATG GCCCGGATCT CAACATCATC ATGCGCGGCA TGACCTATGT GACGCAGTCA
TGGCGTGAAG CGGCAGGTCA TCAGATCTTT AGCATCTCAG GCACGCACTA CACGGGTATT
CACCGGCCTT TGGGAATGCT GGCGCTCAGT GGACCGCCAA TCGCCGCTCT GGGTGCGCAA
CCCGAAGTGC AGATCGTCGA TGTTGCTCCG ACATTAATGT GGCTTTCTGG TCTGCCCATC
CCTGATGATG TCGATGGTCG CCCTCTCGAG GAGTTTGTGC AGGATCATCG CCTGGGATCA
CCAACATTCA TTCATGTTGA GCAGGTAACC GGTCCACTGG CGCCACGTGC AACGTGGACC
GATAGCAGGC AAGAGCAAGA GGTGCTGACA CGCTTGCGCG AATTGGGGTA TCTCGAATAG
 
Protein sequence
MFRMEKHMYR ILVIGLDAAG LDLIEPWIAA GYLPHIAHIL RTGAYAPMRS TIPVMSPPAW 
TSLITGLNPG KHGVYDFVRL LPGSYRLYST RRDQTTYRTI FDHASAYGRY VLAVNIPITY
PPAPVRGIMI SGLGAPRQGR FAHPGELEKE LHVWEYRRDI DVVFAPGKEQ EWIADLQNVT
RSQTDAMLRL LKREPWDLAM LVYRAIDEVE TYFWHHMDPT HPQHDPEKAK MYGSAILKVH
RLLDEEIGRL LEVVGDDTII VLASDHGGGP VYKEVFLNVW LEQQGWLVRR RTHPLNEWRK
NVMRRLHLTS DHLAPMLDFP LAWRIRNLIP QRLQHALVPE SSVTLADVVD WSRTRAYSFG
NIGQIYVNLR GREPQGIVEP GAEYERLLDE ITEALYALTD EGQPVVDAVY RGRDLYTGPY
AGYGPDLNII MRGMTYVTQS WREAAGHQIF SISGTHYTGI HRPLGMLALS GPPIAALGAQ
PEVQIVDVAP TLMWLSGLPI PDDVDGRPLE EFVQDHRLGS PTFIHVEQVT GPLAPRATWT
DSRQEQEVLT RLRELGYLE