Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0470 |
Symbol | |
ID | 5207406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 597504 |
End bp | 599183 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640594090 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_001274845 |
Protein GI | 148654640 |
COG category | [S] Function unknown |
COG ID | [COG3379] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000156785 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00144539 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAGAA TGGAAAAGCA TATGTATCGC ATTCTTGTTA TTGGACTCGA CGCAGCAGGG CTGGATCTGA TTGAGCCATG GATAGCTGCG GGGTATCTGC CTCATATTGC GCATATCCTT CGCACCGGTG CGTATGCGCC AATGCGTTCC ACTATTCCAG TTATGTCGCC GCCAGCATGG ACGTCTCTGA TCACTGGCTT GAATCCCGGA AAGCATGGCG TCTACGATTT TGTGCGTCTA TTGCCTGGAA GTTATCGGCT ATATAGTACC CGGCGCGATC AAACAACATA CCGGACCATC TTCGATCATG CCAGTGCTTA TGGTCGCTAT GTTCTTGCAG TTAATATTCC TATCACCTAC CCACCGGCGC CGGTGCGCGG GATCATGATT TCTGGTCTTG GTGCGCCACG TCAGGGGCGT TTCGCGCATC CAGGCGAGTT GGAAAAAGAA CTTCACGTAT GGGAATATCG CCGCGATATA GATGTTGTCT TTGCTCCTGG TAAAGAGCAG GAATGGATTG CTGATCTTCA GAATGTGACC CGCTCGCAAA CCGATGCTAT GCTGCGGTTG CTCAAGCGTG AGCCATGGGA TCTTGCGATG CTGGTCTATC GAGCAATTGA TGAGGTGGAG ACGTATTTCT GGCATCATAT GGATCCCACC CATCCGCAGC ACGATCCTGA GAAGGCGAAG ATGTACGGAT CGGCAATTCT TAAAGTTCAT CGGTTGCTGG ACGAAGAGAT TGGGCGGCTG CTGGAGGTAG TCGGTGATGA TACGATCATT GTGCTTGCAT CGGATCATGG CGGCGGTCCA GTGTATAAGG AAGTCTTTCT CAATGTCTGG CTCGAACAAC AGGGATGGTT AGTGCGACGG CGCACGCATC CTCTGAATGA GTGGCGTAAG AATGTCATGC GTCGCCTTCA CCTGACCAGC GATCATCTGG CGCCGATGCT TGATTTCCCG CTGGCATGGC GGATTCGTAA TCTTATACCT CAACGCCTGC AGCATGCGTT GGTGCCCGAA TCGTCGGTGA CACTGGCAGA CGTGGTTGAC TGGTCGCGAA CGCGAGCCTA CAGTTTTGGC AATATTGGTC AGATATATGT CAATCTGCGC GGACGTGAGC CACAAGGCAT CGTCGAACCA GGCGCCGAGT ATGAACGGTT GCTGGACGAG ATAACGGAGG CGCTATATGC GCTCACTGAC GAGGGGCAGC CTGTTGTAGA CGCCGTATAT CGAGGGCGCG ATCTCTACAC CGGTCCGTAT GCTGGTTATG GCCCGGATCT CAACATCATC ATGCGCGGCA TGACCTATGT GACGCAGTCA TGGCGTGAAG CGGCAGGTCA TCAGATCTTT AGCATCTCAG GCACGCACTA CACGGGTATT CACCGGCCTT TGGGAATGCT GGCGCTCAGT GGACCGCCAA TCGCCGCTCT GGGTGCGCAA CCCGAAGTGC AGATCGTCGA TGTTGCTCCG ACATTAATGT GGCTTTCTGG TCTGCCCATC CCTGATGATG TCGATGGTCG CCCTCTCGAG GAGTTTGTGC AGGATCATCG CCTGGGATCA CCAACATTCA TTCATGTTGA GCAGGTAACC GGTCCACTGG CGCCACGTGC AACGTGGACC GATAGCAGGC AAGAGCAAGA GGTGCTGACA CGCTTGCGCG AATTGGGGTA TCTCGAATAG
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Protein sequence | MFRMEKHMYR ILVIGLDAAG LDLIEPWIAA GYLPHIAHIL RTGAYAPMRS TIPVMSPPAW TSLITGLNPG KHGVYDFVRL LPGSYRLYST RRDQTTYRTI FDHASAYGRY VLAVNIPITY PPAPVRGIMI SGLGAPRQGR FAHPGELEKE LHVWEYRRDI DVVFAPGKEQ EWIADLQNVT RSQTDAMLRL LKREPWDLAM LVYRAIDEVE TYFWHHMDPT HPQHDPEKAK MYGSAILKVH RLLDEEIGRL LEVVGDDTII VLASDHGGGP VYKEVFLNVW LEQQGWLVRR RTHPLNEWRK NVMRRLHLTS DHLAPMLDFP LAWRIRNLIP QRLQHALVPE SSVTLADVVD WSRTRAYSFG NIGQIYVNLR GREPQGIVEP GAEYERLLDE ITEALYALTD EGQPVVDAVY RGRDLYTGPY AGYGPDLNII MRGMTYVTQS WREAAGHQIF SISGTHYTGI HRPLGMLALS GPPIAALGAQ PEVQIVDVAP TLMWLSGLPI PDDVDGRPLE EFVQDHRLGS PTFIHVEQVT GPLAPRATWT DSRQEQEVLT RLRELGYLE
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