Gene RoseRS_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0466 
Symbol 
ID5207402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp593252 
End bp594160 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID640594086 
Productglycosyl transferase family protein 
Protein accessionYP_001274841 
Protein GI148654636 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0600433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000113237 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGGCTTGA GCGTTTCTGT CGTTATTCCC AGTCTCAACT CTCTGATGAT CGACCAGGTG 
CTTGCTGCGC TTCGCACGCA GAATACACCG CCGGATGAGA TTCTGGTCGT TGGTCTGGAT
AGAGCAGGTT TGGTCAAAGA GGACGCTCAG GTACGGTTAA TCTCAACTGG CAGGCCGGTC
AGCCCTGCAC AGGCGAGGAA TCTGGGTGCA CGCAGCGCAC ACGGAGATGT CATCTGTTAT
ATCGATGCAG ATTGTATTGC TGCTCCTGAC TGGACCAGGC AGCTTCTAGC GCACCATGCT
CGCGGCGCTG AGATCGTCGG CGGTAGTATT CTGGTTGAGC GCACCCATTA CTGGCAGTAT
TGCGACAATC TCGCTGCATT CGCCCCATTT CTTTCGGTGA GTCCTCCCGG TCCTCGTCCA
TACCTGCCCA GTCTCAATTT GAGTATTCGC CGTGCATTGT TGATGAAGTT TGGCGGTTTT
GACGAACGAT TCACGTTTGC TTCCGGCGAG GATACCGACC TGTGCTTTCG GTTGCGACGC
GCAGGTTATA CACTCTGGTT CGAACCGCAA GCGGTTGTTG TGCATCGTCA TATGCGCGCA
TCTCCTGGTG ATTTGTGGCG TCATCTCTAT ATGTACGGCA AAGTGTATGC TGAGATCTAT
CCCCACTACC CGGATCTTCT TGGTGTCTGG CGACGAATGC GTGCGAGCAT CGCCTTTCCA
GGCGCACTGC GTTTGCTTGG TCCAGCGCTT GCTGCCTTTG ATTGTGTCGA ACGTCTGATC
CGCTGGCCCT ATCTATGGCG CTATCTGGAT GCTACTCCTG CACTGTTGCT GGCATCGCTC
GCGTGGTACC ATGGCGCGGC AACAACTCTT CAGATGCAGC AGCATACAAA CGTGGTCGGC
AAGGTATGA
 
Protein sequence
MGLSVSVVIP SLNSLMIDQV LAALRTQNTP PDEILVVGLD RAGLVKEDAQ VRLISTGRPV 
SPAQARNLGA RSAHGDVICY IDADCIAAPD WTRQLLAHHA RGAEIVGGSI LVERTHYWQY
CDNLAAFAPF LSVSPPGPRP YLPSLNLSIR RALLMKFGGF DERFTFASGE DTDLCFRLRR
AGYTLWFEPQ AVVVHRHMRA SPGDLWRHLY MYGKVYAEIY PHYPDLLGVW RRMRASIAFP
GALRLLGPAL AAFDCVERLI RWPYLWRYLD ATPALLLASL AWYHGAATTL QMQQHTNVVG
KV