Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0445 |
Symbol | |
ID | 5207381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 564523 |
End bp | 564984 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640594066 |
Product | hypothetical protein |
Protein accession | YP_001274821 |
Protein GI | 148654616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000109917 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0348791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGGAA ACGTGATGTG CAAGTATCAA TCCATCATCG AAAATCCGGA GAAATTACGT TCTATGACCG GACTGACCGC TGATGAGTTT CACGCGCTGG TTCCGATCTT CCACACTGCA TTTGAAGCGT ACATGAAACA TCGAACCATT GATGGTCACG TCCGATATTG CCGTCGCTAT GTCTCTTATG CAAACTCGCC GCTTCCAACA ACGGAAGATA AATTGCTCTT TATTTTGACC TATCTAAAAC AAAATCCGAC ACAAGTGATG CACGGACACA TCTTTCAGAT GAGCCAGTCG AACGTGAGCA AATGGGTGCA TCTTTTGCAT GGGGCGCTCA ACTACGCGCT ATCCCAGCAA CATCTCCTTC CGGCGCGCAC TGCCGACGAA CTGGCGCAGC GATTGCAGGA GGAACCGCCG CCTTCGGCGG CTCCAACCCC CCTTTTATCC ATGACGGCGT AG
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Protein sequence | MEGNVMCKYQ SIIENPEKLR SMTGLTADEF HALVPIFHTA FEAYMKHRTI DGHVRYCRRY VSYANSPLPT TEDKLLFILT YLKQNPTQVM HGHIFQMSQS NVSKWVHLLH GALNYALSQQ HLLPARTADE LAQRLQEEPP PSAAPTPLLS MTA
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