Gene RoseRS_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0442 
Symbol 
ID5207378 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp561312 
End bp562476 
Gene Length1165 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID640594064 
Producthypothetical protein 
Protein accessionYP_001274819 
Protein GI148654614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0992939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.042563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAC GCCGGACCCT TCACGTGTCC GTCGAGGAGC GGGAGGCCCT CGAAGACCTG 
CGCGATCACG CCCCCAAGCC CTATTTGCGC GAACGGGCGG CGGCATTACT GCTCATCGCG
TCTGGCGTAC CGCCTGCCGT CGTGGCCCGC GAACGCTTGC TGCGTCCGCG CCATCCGGAA
ACCGTCTATC TCTGGCTGAA TCGCTGGGAA GCCGAGGGCA TCGATAGCCT CCCCATCCGG
GACGGACGCG GGCGCACGCC CGCTTTTTCC CCCTGACCGC CATGACCCTG AGACGGCGGC
GACTGAGGTA GAGCATCTGG TCCGCCGTGA CCCGCGGCAG TGCGGGCTGA CCCAGACGCG
CTGGACCCTG GACGCCATCC GCAGCCAGTT GGCGTGGGGG CGCGACGCCT CGCTGAGCGG
GATCGCCCGT ATTCTGGATC GGTTGGGCAT CACCTGGCAG CGCGCCCGCA GTCATGTGCA
TCGCCCTGAT CCCCACGATC AGGCCAAACT GCAGGAGATC GCAGACGTGG TGGAGGATGC
CCGCGCGCAC CCCAACCAGG TGGTGACCGT GTATCTGGAT GAAGTCACGG TCACCCGGCA
ACCGACCCTG GCCAACGGGT ATGGGCGGGC GGGCGCCGAT CAGGTGCGGG CGGAACGGAG
TCTGGCGACC GATTGCGAAC TGCGCATCGT GGGCAGTTTG GACGTTGTGA CGGGCCAGGT
GGTCACCCGG CGGGCGAAGA CGATTGGCCT GGCGACGCTG GCGCCGTGCT TCCCGGACCG
GCGCGCTGCC TATCCTGAGG CTGAGCGCAT CGATGTCATT CTGGATAATT GGCCGGTCCA
TTTTCATCCG GATGTCCTGG TGGCGCTTGA GCCGCAAACA ACCCGCTGGG CGTTTTCCCG
TCCTGGCAAT TGGCCGGCCA CCCCCAGTGT GCGGGCCGTG CGCCGGGCTG GAGATGTCCG
CCTGCCCATC CAACTGATGC CGTTGCCGAC GTATGCGTCG TGGTGTAACC CGATCGAGAA
GCTGTGGCGG TGGATGCGTC AGGAGGTCAC CCGCGTGCAT CGCTGGGCGA CGGATCTCGA
TCAGTTGCGC AACCACCTGG ATGCCTTCTT CGCGTCGTTT GCAACCGGCT CGTCAAAGCT
TTTACAGTAT GTCGGTCTCG GATAG
 
Protein sequence
MPARRTLHVS VEEREALEDL RDHAPKPYLR ERAAALLLIA SGVPPAVVAR ERLLRPRHPE 
TVYLWLNRWE AEGIDSLPIR DGRGRTPAFP PDRHDPETAA TEVEHLVRRD PRQCGLTQTR
WTLDAIRSQL AWGRDASLSG IARILDRLGI TWQRARSHVH RPDPHDQAKL QEIADVVEDA
RAHPNQVVTV YLDEVTVTRQ PTLANGYGRA GADQVRAERS LATDCELRIV GSLDVVTGQV
VTRRAKTIGL ATLAPCFPDR RAAYPEAERI DVILDNWPVH FHPDVLVALE PQTTRWAFSR
PGNWPATPSV RAVRRAGDVR LPIQLMPLPT YASWCNPIEK LWRWMRQEVT RVHRWATDLD
QLRNHLDAFF ASFATGSSKL LQYVGLG