| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0427 |
|---|
| Symbol | |
|---|
| ID | 5207363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 545265 |
|---|
| End bp | 545996 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640594053 |
|---|
| Product | SOS-response transcriptional repressor, LexA |
|---|
| Protein accession | YP_001274808 |
|---|
| Protein GI | 148654603 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000783758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.159781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAC CACAAAAGTT CTATCGAACA GGCTTGCGGT TCTGTGGAAC GGCGCCAGAT
GAAAGGGCAA AACGTATGCG ATCATCAGAT CAACTCTCGG CGCGGCAGCG CGATATTCTT
GGCTTCATCG AGGAGTTTAC CCAGGAACAC GGCTATCCGC CCTCCATCCG CGAAATACAG
GATGGTCTGC GCATTTCCTC GACATCGGTT GTTGCCTACA ATCTCCGCGC TCTGGAGAGC
AAGGGCCTGA TTGATCGCGA CGGCAGGGTA TCGCGCGGCA TCAAGATCAA GAACATGACA
CCGATGCCCC TGAGCCGTGC GCAGGGCGGT CGGGTGCCGC TCCTGGGTGT CATTACCGCC
GGTCAGCCGC TGCCCAACCC GGAAGACACG AGCACCACCG CCGTCGAGAT GATCGAGGTT
CCTGTCGATC TGGCGCCGCC TGAGAAATTG CAGAACGTCT ATGCACTGAA GGTGCGTGGT
CATTCGATGA TCGATGCGCT GATCGACGAT GGCGATATTG TGCTGATGCG CTATCAGGAG
ACCGCCGATA ATGGTCAGAT GGTCGCGGTG CGCATCGAGG ACGATAATGC CGTGACGCTC
AAGCGCTTTT ATCGCGAGGG CGATAAGGTG CGTCTGCAAC CTGCTAACGT CACTATGGAG
CCGATCTACG TCGATGCAGC GCGCGTTCAT ATTCAGGGGC GCGTCGTTGG TGTGCTGCGG
TCGATGTGGT GA
|
|---|
| Protein sequence | MNLPQKFYRT GLRFCGTAPD ERAKRMRSSD QLSARQRDIL GFIEEFTQEH GYPPSIREIQ
DGLRISSTSV VAYNLRALES KGLIDRDGRV SRGIKIKNMT PMPLSRAQGG RVPLLGVITA
GQPLPNPEDT STTAVEMIEV PVDLAPPEKL QNVYALKVRG HSMIDALIDD GDIVLMRYQE
TADNGQMVAV RIEDDNAVTL KRFYREGDKV RLQPANVTME PIYVDAARVH IQGRVVGVLR
SMW
|
|---|
| |