Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0420 |
Symbol | |
ID | 5207356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 537047 |
End bp | 537757 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640594046 |
Product | hypothetical protein |
Protein accession | YP_001274801 |
Protein GI | 148654596 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.159781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAA AGAAGCCATC ACGAATGGTT GCTCACGATC TTGATGAGCA ACCATTCGTC CATTATTACG ATATGCATCC TACGAAAGAG GACTTAATGG GTGAGAGCGC GGCGCAATCG ACGTTAATCC ACTACCTGCT CAGTGTCTTG ACGCATCTGT TCCGCGCCAG ACCTTGCTTT ATCGTCAGTA ATCTCAACAT CTATCGTCAT CGTCGTCGCT ACGAATATCC AATGGCGCCC GATATTGCAG TATTCAAGGG AATCAGCATC CCCAACCCGG CATCACGTGA GTTTCGCAGT TGGAGATTAT ATGAAGCGAA TCGTCCCCCG CCTCAGGTCG TTTTTGAGTT CAGTTCCGAA GAAACGTGGC AGGCGAATAT CTCCAAAAAA CCGGCCAGAT ATGCAGATTT GGGAGTTCGC GAGTACATTG CTTATGATCC GAACGATCCT CCATACTGGC CCGCTGCAAT GGGTCGGCTG CGCGTCTGGC GCTGCACAGG CGACCGCGTT GTCGAAGTCA ATGCCGATGC ACAGGGGCGT GTCTGGAGCG ATGAACTGGA ATGCTGGCTC GTACCCGACG GCGCTCTGCT CCGCCTCATG CTCCCCGACG GTCGGATTGC GCCGACAGAG GCGGAAGCCG AACGCGCCGC CCGTGAAGCA GCCTGGGCAA AACTGCGTGA ACTCGGGGTT GAGATGCCGG ATGAGATATA G
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Protein sequence | MRIKKPSRMV AHDLDEQPFV HYYDMHPTKE DLMGESAAQS TLIHYLLSVL THLFRARPCF IVSNLNIYRH RRRYEYPMAP DIAVFKGISI PNPASREFRS WRLYEANRPP PQVVFEFSSE ETWQANISKK PARYADLGVR EYIAYDPNDP PYWPAAMGRL RVWRCTGDRV VEVNADAQGR VWSDELECWL VPDGALLRLM LPDGRIAPTE AEAERAAREA AWAKLRELGV EMPDEI
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