Gene RoseRS_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0420 
Symbol 
ID5207356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp537047 
End bp537757 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID640594046 
Producthypothetical protein 
Protein accessionYP_001274801 
Protein GI148654596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.159781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAA AGAAGCCATC ACGAATGGTT GCTCACGATC TTGATGAGCA ACCATTCGTC 
CATTATTACG ATATGCATCC TACGAAAGAG GACTTAATGG GTGAGAGCGC GGCGCAATCG
ACGTTAATCC ACTACCTGCT CAGTGTCTTG ACGCATCTGT TCCGCGCCAG ACCTTGCTTT
ATCGTCAGTA ATCTCAACAT CTATCGTCAT CGTCGTCGCT ACGAATATCC AATGGCGCCC
GATATTGCAG TATTCAAGGG AATCAGCATC CCCAACCCGG CATCACGTGA GTTTCGCAGT
TGGAGATTAT ATGAAGCGAA TCGTCCCCCG CCTCAGGTCG TTTTTGAGTT CAGTTCCGAA
GAAACGTGGC AGGCGAATAT CTCCAAAAAA CCGGCCAGAT ATGCAGATTT GGGAGTTCGC
GAGTACATTG CTTATGATCC GAACGATCCT CCATACTGGC CCGCTGCAAT GGGTCGGCTG
CGCGTCTGGC GCTGCACAGG CGACCGCGTT GTCGAAGTCA ATGCCGATGC ACAGGGGCGT
GTCTGGAGCG ATGAACTGGA ATGCTGGCTC GTACCCGACG GCGCTCTGCT CCGCCTCATG
CTCCCCGACG GTCGGATTGC GCCGACAGAG GCGGAAGCCG AACGCGCCGC CCGTGAAGCA
GCCTGGGCAA AACTGCGTGA ACTCGGGGTT GAGATGCCGG ATGAGATATA G
 
Protein sequence
MRIKKPSRMV AHDLDEQPFV HYYDMHPTKE DLMGESAAQS TLIHYLLSVL THLFRARPCF 
IVSNLNIYRH RRRYEYPMAP DIAVFKGISI PNPASREFRS WRLYEANRPP PQVVFEFSSE
ETWQANISKK PARYADLGVR EYIAYDPNDP PYWPAAMGRL RVWRCTGDRV VEVNADAQGR
VWSDELECWL VPDGALLRLM LPDGRIAPTE AEAERAAREA AWAKLRELGV EMPDEI