Gene RoseRS_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0419 
Symbol 
ID5207355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp534982 
End bp536049 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content60% 
IMG OID640594045 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001274800 
Protein GI148654595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.499912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CGTCGACCGA TCTGATCCAG GTGCGGAACC TGAAGATGCA CTTCCCCGTG 
ACGAAAGGTG CGATTATCAA GCGCACCGTC GGTTATGTCA AAGCCGTCGA TGGCGTGACA
TTCTCGATCA AACGGGGCGA AACGCTGGGG CTGGTGGGAG AGAGCGGATG CGGGAAATCC
ACCACCGGTC GCGCCATTTT GCAACTCTAC AAGCCAACCG CTGGCGAGGT GCTGTTCCAG
GGAACCGATC TGACCCGCCT GCACGGGGAA GAGTTGCGCC GGATGCGGCG CAAGGTGCAG
ATGATCTTCC AGGACCCGTA TGCGTCGCTC AATCCGCGCA TGACGGTGGG CGACATCATC
GGTGAGCCGA TTGCCGTCCA TAATCTGCGT CAGGGGAAGG CAGCCATCCG TGAGCGGGTG
CAGGAACTGC TCGAACTCGT CGGTCTTAAC CCCTATTTTA TCAATCGCTA TCCCCACGAG
TTTTCCGGCG GTCAACGTCA GCGCATCGGC ATCGCACGCG CATTGGCGGT CGAACCGGAA
TTTGTCGTAT GTGATGAACC GGTGTCGGCA CTCGACGTCT CGATCCAGGC GCAGGTGCTC
AATCTGCTTG AAGACCTGCA ACACCGCCTT GGATTGACCT ACCTGTTCAT TGCTCACGGC
CTGGCGGTCG TCAGGCATAT CAGCGACCGC GTGGCGGTGA TGTATCTGGG GAAGGTGGTT
GAACTGGCAG AGGGGAAGAA ACTCTACTCC ATGCCGATGC ACCCCTACAC CCAGGCGCTT
CTGTCAGCAG CGCCGATTCC CGATCCGACC GTCGAGCGCA AACGACAACG CATCATTCTG
GAGGGTGATG TGCCCAGTCC GTTCAATCCG CCGCCGGGTT GCCACTTCCA CACCCGTTGC
CCGATCGCCA TCGAACGCTG CAAAGTCGAA GAGCCGCCCT TCCAGGATTA CGGCGATGGG
CATTTCGTCG CCTGCTGGCG CGCACCCGAG TCGATTGCGT TGATGGAACA GTATGTGGCG
CGCCCGAATA ACGGCGCGTC TCCGGGTGTG CCACAGGCGA GCGCGTGA
 
Protein sequence
MSATSTDLIQ VRNLKMHFPV TKGAIIKRTV GYVKAVDGVT FSIKRGETLG LVGESGCGKS 
TTGRAILQLY KPTAGEVLFQ GTDLTRLHGE ELRRMRRKVQ MIFQDPYASL NPRMTVGDII
GEPIAVHNLR QGKAAIRERV QELLELVGLN PYFINRYPHE FSGGQRQRIG IARALAVEPE
FVVCDEPVSA LDVSIQAQVL NLLEDLQHRL GLTYLFIAHG LAVVRHISDR VAVMYLGKVV
ELAEGKKLYS MPMHPYTQAL LSAAPIPDPT VERKRQRIIL EGDVPSPFNP PPGCHFHTRC
PIAIERCKVE EPPFQDYGDG HFVACWRAPE SIALMEQYVA RPNNGASPGV PQASA