| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0418 |
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| Symbol | |
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| ID | 5207354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 533928 |
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| End bp | 534947 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594044 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001274799 |
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| Protein GI | 148654594 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.755562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.486324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC CGCTGCTCGT CGTCAAGAAC CTTGAGACTC AGTTCAAGAC CCAGGACGGG
ATCGTCAAAG CCGTCAATAA TGTTTCGTTC CACGTTGATC GCGGTGAGAC TCTCGGCATC
GTCGGCGAGA GCGGTTCGGG GAAGAGCGTC ACGTCCCTCT CAATTATGCG CCTCATTCCC
AATCCGCCGG GCAGGATCGT CGGCGGGCAG ATCATCTTCG ATGGCGACAA TCTGCTCGAC
TACACCGAAG AAGAAATGCG CCACATTCGT GGCAACCGGA TTGCGATGAT CTTCCAGGAT
CCAATGACAT CGCTCAATCC GGTGCTGACG ATCGGGCGCC AGATCACCGA GTCGCTTGAA
CTGCACATGA AACTGACGCC CAAAGAAGCA CGCAACCGGG CGGTCGAACT GTTGCAGATG
GTCGGCATCC CTGGCGCCGA ACGCCGCCTC GATGACTACC CGCATCAGTT CTCCGGCGGA
ATGCGCCAGC GCGTGATGAT CGCCATGGCG CTGTCGTGCA ACCCGGAGTT GCTGATCGCC
GATGAACCAA CAACTGCGCT CGATGTGACG ATCCAGGCGC AGATCCTCGA ACTCATCCAG
CGGTTGCAGC ACGAACTCGG CACGGCAGTG ATCATCATCA CCCACGACCT TGGCGTCGTC
GCCGGGATGG CAGACCGGGT GATCGTGATG TATGCCGGGC GGGTGGTGGA GGAGGGTCCT
ACTGAAGAGA TCTTCGCCCG TCCCCGCATG CCGTACACGA TTGGTCTGCT GCGTTCAATC
CCGCGCCTCG ATGAGGAGGA AGGGCGAACG TTGACCCCTA TTCGCGGGTT GCCGCCCGAC
CTGATCAACC TGCCGCAGAT CTGCCCCTTC AGTCCGCGTT GCGACTATTT CATCCCCGGT
ACGTGCGATC AGCAGGTTCC GCCGTTGCGC GAGGTGGTTC CAGGTCACAA GGCGGCCTGC
CTGTTCGATA TTACGCTCGA AACGCCGCTC CCTACAACCG GCGGCGAGGT GCCAGCATAG
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| Protein sequence | MSQPLLVVKN LETQFKTQDG IVKAVNNVSF HVDRGETLGI VGESGSGKSV TSLSIMRLIP
NPPGRIVGGQ IIFDGDNLLD YTEEEMRHIR GNRIAMIFQD PMTSLNPVLT IGRQITESLE
LHMKLTPKEA RNRAVELLQM VGIPGAERRL DDYPHQFSGG MRQRVMIAMA LSCNPELLIA
DEPTTALDVT IQAQILELIQ RLQHELGTAV IIITHDLGVV AGMADRVIVM YAGRVVEEGP
TEEIFARPRM PYTIGLLRSI PRLDEEEGRT LTPIRGLPPD LINLPQICPF SPRCDYFIPG
TCDQQVPPLR EVVPGHKAAC LFDITLETPL PTTGGEVPA
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