| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0415 |
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| Symbol | |
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| ID | 5207351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 530831 |
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| End bp | 531835 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594041 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001274796 |
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| Protein GI | 148654591 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.825229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA CAACATCGGC GCCAGCGGCG CCTGGCGCGC TTGATCGGTT GCAGACGCGC
TCTGAAGGAC AGTGGGCGGT TGTCTTCCGC CGGTTTCGCC GGCACCGACT GGCAATGGTC
AGTCTTGCCG TTTTGATCCT GATCTTTACC GCTTCGATCC TGGCGCCCTG GATCGCTCCT
TTCCCGCGTG ACGATATCGG CTTGAACCGC ACCCGCCTCC CGCCAATGAG CGCTGACCCG
GCCACGGGTC AACTCCATAT CCTTGGCACC GACCACCTGG GGCGCGATTT CTTCACCCGC
GTAATCTATG CAGCACGGGT GTCGCTCATG GTGGCGGTTT CGGTCACGAC GCTGGTGGCG
ATCATTGGTA CAACCCTTGG CTTGCTGGCG GGGTTCTTCG GCAGTTGGGT CGATAATACA
ATCAGCCGTA TCATGGAGTT TGTCGCAACG ATCCCCGATC TGCCGATCCT GCTGATCCTC
AGTGCAATCA TGATCCAGAA TGCTGACCTG ATCGTTCTCC CGTCCTGGAT CATCGGTCCG
GTCGCCTGGA TCATGGCAGT GCCCAACCGC GAGGCGACGC AGGTGGCATT GCTGATCCTG
GTGCTCGCGT CGCTCGGTTG GGTCGGTGTG GCGCGTCTGA TGCGCGGCAT GGTGCTTCAG
GTGCGCGAAA TGCAGTACAT CGAGTCGGCG CGCGCCCTCG GCGGCTCGAA TGCGTGGATC
CTGCTCAAGC ACGTCTTCCC GAATGCCTTC CCGCCGCTGA TCGTGGCGTT TACCCTTGGT
CTCAATGGCG CGCTGGTGAG CGAAGTGGCA ATCAGTTTCC TCGGTTTCGG CGTGCAGGAC
CCGACGCCGA CCTGGGGGAA TATGATGGGG TTTGCAACCA GTTATATGTT CAATCATCCG
TGGATGCCGC TCATCCCCGG TTTGCCGATC TTTCTCTGTT CGCTGGCGTT CAACTTTATC
GGTGATGGAT TGCGCGACGC TCTCGATCCG CGCTTGAAAC TGTAA
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| Protein sequence | MATTTSAPAA PGALDRLQTR SEGQWAVVFR RFRRHRLAMV SLAVLILIFT ASILAPWIAP
FPRDDIGLNR TRLPPMSADP ATGQLHILGT DHLGRDFFTR VIYAARVSLM VAVSVTTLVA
IIGTTLGLLA GFFGSWVDNT ISRIMEFVAT IPDLPILLIL SAIMIQNADL IVLPSWIIGP
VAWIMAVPNR EATQVALLIL VLASLGWVGV ARLMRGMVLQ VREMQYIESA RALGGSNAWI
LLKHVFPNAF PPLIVAFTLG LNGALVSEVA ISFLGFGVQD PTPTWGNMMG FATSYMFNHP
WMPLIPGLPI FLCSLAFNFI GDGLRDALDP RLKL
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