| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0409 |
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| Symbol | |
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| ID | 5207345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 519730 |
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| End bp | 521208 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594035 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001274790 |
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| Protein GI | 148654585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACT TTGTTCTCAT CCTCCTGAGC ATGATCATTC TGACTGCGAC TGGTGTGTAT
GTGCTGATAC AGGACTGGCG CGCAACGACA AACCGCCTGT TCGCATTGTT TGCTCTCAGC
GCTGTTCTGC TCATGTATTG CGCTGTGCTG CGCTTCACGG GAAGCGATCC GTGGGAAGTG
TGGTTCGTCT ATGGATTGTC GGCGCCGTTG CTTGCTGTAT CTTCCTGGTT ACTGATCTGG
CTGATTCTGG CGATCTTTAT TCCGCACCGG TATGCACAAC CGACAGTGCG CCGGGCGCTT
GCGGCGCCGT ACCTGTTCAT GGCGCTGTTC CTGACGCTGG ACTGGTATAG CGGTCTCGGT
CTGGTCAGAC GTATGGACGC ATCCGAAGCA ACAGGCATGC CGGGTCTTTT GAACGGTCCA
CTGTATATGC TGGTGATCAT ATCGTATATT CTCGGCGGCT TGCTTGTTCC TGTAGCAATG
TTGATCACGG TTGCCGCGCG TCGGCGCAGT GTGCGCGTAC CGGCGGCGTG GCTGTCGGGC
GGTCTGGCGC TCTCCTTTGC AGCAGGCGCA TGGTTCGGTC CGATGTACTG GCTGGCGTTG
AATTATGTCA GCATGCTTCC GCTCTATCTT GCATTTGGAT GGTTGACATT GCGGTATCAG
ATGTTTCGCC CATCACAGGT TGCGCTGCGC ACCGCCGTTG AGTCTCTGCC GGATGGCGTG
GTGATTATCG ATGCGCAGCG GCAGGTTCGT TTTGCGAACC GCGCAGCGCG GCAACTGGCG
TCGCTGAACG ACGATGGCGA GACGACATTC GAAACAGCTC TGGCGCGCGC AGGGTTTCAG
GACTGCACGA TGTCGGAGGA TCGTCTCGCC GGTGTGCGGC GCTTTCATCG TGAGGGTGAG
GCCGAAGCAA CGCTGATCGT CTCAGAGGTT GCTATCAAGG GTGATCATAC CTCCGGCAGC
GTGCTGCTCC TCCGCGATGT GACGACGGCG GAACGCCAGA GAGCGGCGCT GGCGGCATCG
CACGCTGCGC TCGAAGAACG CACCGCAGCG CTGGAACGCT CGCTCGATGA GATCCGCCAG
CGAGACGCGA TGATCACTCG TTTGACGCTG CCACTGATCC CGTTGAGCGA AGGGGTGCTG
GCGCTGCCGC TGATCGGCGC CTTCACCGGC GAACGCAGCC AGGCGATGGT TACGCTGCTG
CTGAACCAGA TCGAGCAACG ACGCGCGCAG AAGGTGCTGC TCGATCTGAC CGGCATCACC
GGTTTTGATC ATTCCCTCGC CGTGGCGCTG CACCAGGCAG CCGACGGCGC TCGCCTGATG
GGGGCGCAGA TCGTGCTGTG CGGCGTGCGC CCCGATATTG CTGAAAGCAT CGTCCGTGAG
CGATTGGAGA TACACGGCAT TCAGTACTTT GCAACGATGC AAGAGGGGGT CGCTGCGCTC
TTGCATCAGA GTAACAGATC GTCACCGGTG CATCAATGA
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| Protein sequence | MINFVLILLS MIILTATGVY VLIQDWRATT NRLFALFALS AVLLMYCAVL RFTGSDPWEV
WFVYGLSAPL LAVSSWLLIW LILAIFIPHR YAQPTVRRAL AAPYLFMALF LTLDWYSGLG
LVRRMDASEA TGMPGLLNGP LYMLVIISYI LGGLLVPVAM LITVAARRRS VRVPAAWLSG
GLALSFAAGA WFGPMYWLAL NYVSMLPLYL AFGWLTLRYQ MFRPSQVALR TAVESLPDGV
VIIDAQRQVR FANRAARQLA SLNDDGETTF ETALARAGFQ DCTMSEDRLA GVRRFHREGE
AEATLIVSEV AIKGDHTSGS VLLLRDVTTA ERQRAALAAS HAALEERTAA LERSLDEIRQ
RDAMITRLTL PLIPLSEGVL ALPLIGAFTG ERSQAMVTLL LNQIEQRRAQ KVLLDLTGIT
GFDHSLAVAL HQAADGARLM GAQIVLCGVR PDIAESIVRE RLEIHGIQYF ATMQEGVAAL
LHQSNRSSPV HQ
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