Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0407 |
Symbol | |
ID | 5207343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 517219 |
End bp | 518679 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594033 |
Product | potassium/proton antiporter |
Protein accession | YP_001274788 |
Protein GI | 148654583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.495315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTG AACTCATCCT GATGATCGCA GCGTTGCTTT TGATCCTCAG CATCATTGCC GGAAAAGCAT CGCTCCGGTT CGGGTTGCCT GCACCGTTGC TCTTCCTGAT CATCGGGATG CTCGCCGGTT CCGACGGTCC GCTCGGCATC TACTTTGATG ACGCCTGGCT GGCGCAGTCG GTCGGCGTGC TGGCGCTGGT GCTAATCCTG TTCTCCGGCG GGTTGGGCAC CGACTGGCAG ATGATCCGTC CGGTCTTGTG GACCGGGATG ATCCTGGCGA ATCTGGGGGT GTTGATCAGC GCACTGCTGG TAGCCGTCGC CGCGCACCTC CTGCTCCAGT TCTCAATCCT GGAAGGGTTC CTGCTCGGAG CGATCATCTC GTCAACCGAT GCCGCTGCGG TTTTCGCGGT GATGCGCACG CGGGATGTCA ATCTGCGCGA TAATCTGGAA GGGTTGATCG AACTCGAGTC GGGCAGCAAT GATCCGATTG CCGTGTTTCT GACGATTGGC CTGACCATGG TGCTTGCCGA CCCGTCGCGC TCGCTGGCAA GCCTGGCGCC GCTGTTCGTG CTGCAGATGA CCGTCGGCGG CGTGGCCGGG TATGCGATGG GCCGGTTGAT GGCGATCACG ATCAATCGCG CAAAACTGCA ACTGGAAGGG TTGTATCCGG CGCTGGCGCT GGGGTTGGTG CTGTTGACCT ATGGCGGTAC GGCGCTGATC AACGGCAGCG GGTTTCTTGC GGTCTATCTC GCCGGCATTG TGCTTGGCAA CTGCGATTTT GCCCACAAAC GGAGTCTCAT TCGTTTTTAT GACGGGCTGG CATGGCTCAT GCAGATCGCC ATGTTCCTTG TCCTGGGCTT GCTGGTGTAC CCCTCGCGCA TCGTTCCAAT CATCGGCGAA GGGTTGCTTA TGTCCGCATT TCTGGTTTTT GTGGCGCGTC CGGTGGCAGT CTTTGTGTCG CTTGCTTTCT CCCGCTACGA CTGGCGCGCT AAAGCGATGG TTTCCTGGGC TGGACTGCGC GGTGCAGCGC CGATCGTGCT GGCAACCTTC CCGCTGCTGG CAGGGCTGGA TCGCGCTGGC ATGGTGTTCA ACCTGGTCTT TTTTATCGTC CTGACCTCGG TGTTGATCCA GGGTACCACT ATTGCGTATG TTGCACGCTG GCTCGGTGTG CAGCAACCGC GTCCACAGGC GACGTTTCAC TATCCGCAAG AGTTCATTCC ACAGGTCAGC GCCAGCAGTC AACTGGTTGA GTTGACCGTT GCACCCGGTT CCCCCGCGTG TGGGCGGGCG ATTATGGAAC TTGGATTGCC GCGTGGTGCG CTGGTGGTGC TGATCAACCG CAGTGACGAT AGCCTGGTGC CGGGCGGCAC AACGATTCTG GAGCCGGGGG ATCGGGTGTT GCTGCTGGCG GAACGCAGCG CTCTCGACGA TGTGCGGCGC GTGTTGAGTA ATGAAGGTTG A
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Protein sequence | MSLELILMIA ALLLILSIIA GKASLRFGLP APLLFLIIGM LAGSDGPLGI YFDDAWLAQS VGVLALVLIL FSGGLGTDWQ MIRPVLWTGM ILANLGVLIS ALLVAVAAHL LLQFSILEGF LLGAIISSTD AAAVFAVMRT RDVNLRDNLE GLIELESGSN DPIAVFLTIG LTMVLADPSR SLASLAPLFV LQMTVGGVAG YAMGRLMAIT INRAKLQLEG LYPALALGLV LLTYGGTALI NGSGFLAVYL AGIVLGNCDF AHKRSLIRFY DGLAWLMQIA MFLVLGLLVY PSRIVPIIGE GLLMSAFLVF VARPVAVFVS LAFSRYDWRA KAMVSWAGLR GAAPIVLATF PLLAGLDRAG MVFNLVFFIV LTSVLIQGTT IAYVARWLGV QQPRPQATFH YPQEFIPQVS ASSQLVELTV APGSPACGRA IMELGLPRGA LVVLINRSDD SLVPGGTTIL EPGDRVLLLA ERSALDDVRR VLSNEG
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