Gene RoseRS_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0407 
Symbol 
ID5207343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp517219 
End bp518679 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content60% 
IMG OID640594033 
Productpotassium/proton antiporter 
Protein accessionYP_001274788 
Protein GI148654583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.495315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTG AACTCATCCT GATGATCGCA GCGTTGCTTT TGATCCTCAG CATCATTGCC 
GGAAAAGCAT CGCTCCGGTT CGGGTTGCCT GCACCGTTGC TCTTCCTGAT CATCGGGATG
CTCGCCGGTT CCGACGGTCC GCTCGGCATC TACTTTGATG ACGCCTGGCT GGCGCAGTCG
GTCGGCGTGC TGGCGCTGGT GCTAATCCTG TTCTCCGGCG GGTTGGGCAC CGACTGGCAG
ATGATCCGTC CGGTCTTGTG GACCGGGATG ATCCTGGCGA ATCTGGGGGT GTTGATCAGC
GCACTGCTGG TAGCCGTCGC CGCGCACCTC CTGCTCCAGT TCTCAATCCT GGAAGGGTTC
CTGCTCGGAG CGATCATCTC GTCAACCGAT GCCGCTGCGG TTTTCGCGGT GATGCGCACG
CGGGATGTCA ATCTGCGCGA TAATCTGGAA GGGTTGATCG AACTCGAGTC GGGCAGCAAT
GATCCGATTG CCGTGTTTCT GACGATTGGC CTGACCATGG TGCTTGCCGA CCCGTCGCGC
TCGCTGGCAA GCCTGGCGCC GCTGTTCGTG CTGCAGATGA CCGTCGGCGG CGTGGCCGGG
TATGCGATGG GCCGGTTGAT GGCGATCACG ATCAATCGCG CAAAACTGCA ACTGGAAGGG
TTGTATCCGG CGCTGGCGCT GGGGTTGGTG CTGTTGACCT ATGGCGGTAC GGCGCTGATC
AACGGCAGCG GGTTTCTTGC GGTCTATCTC GCCGGCATTG TGCTTGGCAA CTGCGATTTT
GCCCACAAAC GGAGTCTCAT TCGTTTTTAT GACGGGCTGG CATGGCTCAT GCAGATCGCC
ATGTTCCTTG TCCTGGGCTT GCTGGTGTAC CCCTCGCGCA TCGTTCCAAT CATCGGCGAA
GGGTTGCTTA TGTCCGCATT TCTGGTTTTT GTGGCGCGTC CGGTGGCAGT CTTTGTGTCG
CTTGCTTTCT CCCGCTACGA CTGGCGCGCT AAAGCGATGG TTTCCTGGGC TGGACTGCGC
GGTGCAGCGC CGATCGTGCT GGCAACCTTC CCGCTGCTGG CAGGGCTGGA TCGCGCTGGC
ATGGTGTTCA ACCTGGTCTT TTTTATCGTC CTGACCTCGG TGTTGATCCA GGGTACCACT
ATTGCGTATG TTGCACGCTG GCTCGGTGTG CAGCAACCGC GTCCACAGGC GACGTTTCAC
TATCCGCAAG AGTTCATTCC ACAGGTCAGC GCCAGCAGTC AACTGGTTGA GTTGACCGTT
GCACCCGGTT CCCCCGCGTG TGGGCGGGCG ATTATGGAAC TTGGATTGCC GCGTGGTGCG
CTGGTGGTGC TGATCAACCG CAGTGACGAT AGCCTGGTGC CGGGCGGCAC AACGATTCTG
GAGCCGGGGG ATCGGGTGTT GCTGCTGGCG GAACGCAGCG CTCTCGACGA TGTGCGGCGC
GTGTTGAGTA ATGAAGGTTG A
 
Protein sequence
MSLELILMIA ALLLILSIIA GKASLRFGLP APLLFLIIGM LAGSDGPLGI YFDDAWLAQS 
VGVLALVLIL FSGGLGTDWQ MIRPVLWTGM ILANLGVLIS ALLVAVAAHL LLQFSILEGF
LLGAIISSTD AAAVFAVMRT RDVNLRDNLE GLIELESGSN DPIAVFLTIG LTMVLADPSR
SLASLAPLFV LQMTVGGVAG YAMGRLMAIT INRAKLQLEG LYPALALGLV LLTYGGTALI
NGSGFLAVYL AGIVLGNCDF AHKRSLIRFY DGLAWLMQIA MFLVLGLLVY PSRIVPIIGE
GLLMSAFLVF VARPVAVFVS LAFSRYDWRA KAMVSWAGLR GAAPIVLATF PLLAGLDRAG
MVFNLVFFIV LTSVLIQGTT IAYVARWLGV QQPRPQATFH YPQEFIPQVS ASSQLVELTV
APGSPACGRA IMELGLPRGA LVVLINRSDD SLVPGGTTIL EPGDRVLLLA ERSALDDVRR
VLSNEG