| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0402 |
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| Symbol | |
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| ID | 5207338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 509117 |
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| End bp | 510601 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594028 |
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| Product | sugar transferase |
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| Protein accession | YP_001274783 |
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| Protein GI | 148654578 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.597497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTC GCAGCGTTCT CAACCATCCA ACACAGCCGT GTGAGATGTC ATTCCATCTG
CGCTTGGAGA TTTCCGAGCG TCGGTTGTTG CTGCGCGTTG GTGATCTGGC GTTGACCATG
CTCGCCGTCT TCGGAGCGTT GTGGTTCTGG GCGCGTCTGG CGGATCGTGC GCTCAATGTC
GCTCTGATCC AATCGCAGTT CAGTTGGTTG GCGCTGATCG GCATTGGCTG GCCCCTCTGG
CTGATGCTCG CAGATATGTA CAATCTGCGT CTGGTCGCAC GCATCGGTCC GAGCGTGCGC
CGGATTCTGC TTGGCGGTCT GGCGCTGCTG TTCGCGTATC TGGCGCTGTT CTTCGTACTG
TCACGTGCGC CGGTCACCGG GATGCTTGCG TCGATTGAAA TTGGCACGCC GCAACTGCGC
CTGGCGCCTG CGCTTGCGAT TGTGCTGCTG GTCGCGTCGA TGGCGATCTG GCGTCTGGCA
TACATTCGTG TGCTGGGCGC ACCGCACGCG CGACGTCGGT TGCTGATCCT GGGAACGGGT
CAGGCAGGTT CGGCGCTGTC GCATGTTATT CTGAAGGGGC ACACCCCATA CTACGAGATT
GTCGGGTTTG TCGATGATGC CCCCCTTCCA TCCTGTGACT GCATCGGCAG CGTGCCGGTG
CTTGGCGGCG TTGACCGCCT CGGCGATGTC GTCTGGGATC AGCGTGTCGA TGAGATTGTG
ATTGCCAGCA GCGATGTCAG CGGCGAACTG CTCCAGTTCT TGATCGACTG CTATGAACAC
GGAGTTGCTA TTACGCCGAT GCCGCTGCTG TACGAACGGT TGACCGGGAA GATTGCAGTG
GAACACGCTG GCAATCAGTG GCATGTGGCG CTGCCGTTGC AATCACGTCC GACACGGACT
GCCGAGGCGG TGTTGAAACG CATGCTCGAT CTGGTCGGCG GTCTGGTTCT GTTTGGGTTG
CTGCTTGTTC TGCTGCCATT CATTGCGCTT GCGATTCGTC TTGACACGCC CGGTCCCATC
CTGTACCGGC AGCAGCGTGT TGGCTGGCGA GGACGAATCT TTACAGCGCT CAAGTTTCGC
TCGATGGTTC AGGATGCCGA ACCGGACGGC GAGGCGCAGT GGGCATCGAA GGACGACTCG
CGTGTGACGC GCGTTGGGCG CTGGTTACGG CGCACCCGCC TTGATGAACT ACCGCAGGCG
TTGAATGTTC TGCGTGGCGA GATGAGTCTG GTCGGACCAC GTCCCGAACG ACCGGAGTTT
GTCGAGCAGT TGCAGCGCGT TATTCCGTTC TACCGCGCGC GACTGGCGAT CAAACCGGGG
CTGACAGGGT GGGCGCAGAT CAACTATGGC TATGGCAATA GCATTGAAGC ATCGCTTGCC
AAACTCCAGT ACGACCTTTA CTATCTGAAG CATCAGTCGT TCTGGTTCGA TCTGCTCATT
CTGGCGCGAA CGGTCTACGT TGTGCTGTTG ATGAAAGGTC AATAG
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| Protein sequence | MSRRSVLNHP TQPCEMSFHL RLEISERRLL LRVGDLALTM LAVFGALWFW ARLADRALNV
ALIQSQFSWL ALIGIGWPLW LMLADMYNLR LVARIGPSVR RILLGGLALL FAYLALFFVL
SRAPVTGMLA SIEIGTPQLR LAPALAIVLL VASMAIWRLA YIRVLGAPHA RRRLLILGTG
QAGSALSHVI LKGHTPYYEI VGFVDDAPLP SCDCIGSVPV LGGVDRLGDV VWDQRVDEIV
IASSDVSGEL LQFLIDCYEH GVAITPMPLL YERLTGKIAV EHAGNQWHVA LPLQSRPTRT
AEAVLKRMLD LVGGLVLFGL LLVLLPFIAL AIRLDTPGPI LYRQQRVGWR GRIFTALKFR
SMVQDAEPDG EAQWASKDDS RVTRVGRWLR RTRLDELPQA LNVLRGEMSL VGPRPERPEF
VEQLQRVIPF YRARLAIKPG LTGWAQINYG YGNSIEASLA KLQYDLYYLK HQSFWFDLLI
LARTVYVVLL MKGQ
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