Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0401 |
Symbol | |
ID | 5207337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 507927 |
End bp | 509120 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594027 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001274782 |
Protein GI | 148654577 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | [TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGGTG CGGCGATGAA CATCCTCTTT GTTGCACCAC GCTTCCCCGA TCCGCTCATC CAGGGCGACC GGCTGCGCGC GCGTCAGTTC CTGCGCGTTC TGCGCCGCTG GCACGAGATC ACCCTCGTCA CACCCGCGAC GCCAGAGCTG CCAGACGCTG CCACCATCGC CGACATGTGT GACCGGTGGG TTCCAGTGCA TGAACCGCGC TGGCGGGCGC TGTGGCGCGT CGCGTCGCAT AGTATTGAGA CGCTGCCATT GCAGACAGCG CTGTTCAGTT CGCCAGCGTT GATCCGCACC GTGCGCGACC TGGCGCATCA CCAATCATTC GACTTACTCT ACCTGCATAC CGCACGGGTA GCGCCGGTGG TCGACGCCGT CCCGGATCTA CCGAAAGCAA TCGACTTTAT CGACGCGCTG TCGCTGAATA TGTATCGCCG CGCCCGCTGT CAGGGCGGTA TCACGCACTG GTTGTTCGAT ATTGAAGCGC GCCGGATGGC AGAATGCGAG CAGTACCTTT CCGAAATATG CGATGTACAG TTCGTCTCGG CAGTTCGTGA TCGCGCATTC TTAGGACCGA ACGTTCGAGT TGTCAACAGT GGGGTTGACG TGGCCCAGTT TCCTTATGTA GAACAGGGAC GTCTCAACGA TCTCATTGTC TTGACTGGCC GCATGGGATA CTTCCCCAAT GCGGACGCCG CAGTTTCGTT TGCTTCAAAC GTCTTGCCCC TGGTCCGGCA CGAGGTGCCA ACGGCACGCC TGCAGATCGT TGGCGCCGAT CCGCCGCAGC GCGTACGAGC ACTGGCGCGT TTGCCGGGTG TTGAGGTGAC TGGCCACGTG CCTCGTATCC AGGACTATCT GCAACGCGCG ACAATCGCAG TGGCGCCGTT ACGCAGTGGC TCAGGCTTTC AGACTAAAGT AGCTGAAGCA ATGGCAAGCG GTACTCCAGT TGTGGCGACG CCGCACATAC TGGATTCGCT TGATGTTCGT CATGACGAGC ATGTGCTTCT GGCGCACGAT GATGCTGAAA TGGCAGCGCA AATCGTGCGC CTGCTGCGCG ATGCTGCGCT GCGCCGCCGG TTGGCGCGGG CAGCACGCGC GCTGGTTGAA CAGCGTTATA CCTGGGAACG CTCGGCCGCA GCGATCAATG CACATCTCGT TGCGGTCGTT CAGCAAGGCA AAAAGATATC ATGA
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Protein sequence | MRGAAMNILF VAPRFPDPLI QGDRLRARQF LRVLRRWHEI TLVTPATPEL PDAATIADMC DRWVPVHEPR WRALWRVASH SIETLPLQTA LFSSPALIRT VRDLAHHQSF DLLYLHTARV APVVDAVPDL PKAIDFIDAL SLNMYRRARC QGGITHWLFD IEARRMAECE QYLSEICDVQ FVSAVRDRAF LGPNVRVVNS GVDVAQFPYV EQGRLNDLIV LTGRMGYFPN ADAAVSFASN VLPLVRHEVP TARLQIVGAD PPQRVRALAR LPGVEVTGHV PRIQDYLQRA TIAVAPLRSG SGFQTKVAEA MASGTPVVAT PHILDSLDVR HDEHVLLAHD DAEMAAQIVR LLRDAALRRR LARAARALVE QRYTWERSAA AINAHLVAVV QQGKKIS
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