| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0399 |
|---|
| Symbol | |
|---|
| ID | 5207335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 505728 |
|---|
| End bp | 507026 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640594025 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274780 |
|---|
| Protein GI | 148654575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCAA TCCTTCTCAT CCTCATCTCG ACTCTCCTGG CGCTGATACC ATCGTCTTCC
GCCGGGTCTG GTGCGGCCAC ATCGACGATA TATCTCCCGC TGGTAAGCGT GCCTGACACC
CGCGTTCTGA TTGGGTATGA CCTGCGGACG AACCGCGGCG CACATGCGGA GCCGTTGTTA
CCGGCGCTCC CGGCGAGCTG GGCGCGCGCC GGTGATCTGG TCTGGGCGAC AATCGAGCCG
ACACGCGGCG TTTATTCCTG GGAAGCGGCA GCGGCGCTGG AGGCAAATAT CCGCCGTCTG
CGCGCTGCTG GCATCGAGCC GATTGTCCTG GTGCAGATCG CGCCGCAGTG GGCGCGTCGT
CTCCCTGGGC GAACGTGCAG CTCCGTAGCG CCTGAAGCCT ACGCTGATCT GGCGCGCTTT
GCTACTGCTG CCGCAACGCG TTACCGGAGC GGTGATCTGA ATGTGCGATA CTGGCAATTC
TGGAATGAGC CGGATTTCAC CCCGGCAATC AGCGACAATA ACGGGAGCGG TTGCTGGAAT
ACCGGTCAGG CGCCATGGTA CGGCGGCGAT GCGTATGGCG CTGCGCTGCG CGTGTTCGCC
GACGCCATCC GGTCGGTCAA TCCATCGGCG CAAATTATTG GCGGGAATTT CGCGCACTTC
TGGCCCGATG ACCGGCAAAC CATCGGGTTT TTGCGCGGCA TGATCGAGGG CAGCGGGCTG
GCGTGCGACA TGATCGGTTT CACCGGCTAC ACGTATTGGG GGAGCGCAGA GCGGATGACC
TTGAAGGCAC AGAGTCTCCG GCGTGCGCTG GCAACCTATG GTCTCCAACA CATGCCGCTC
GCCGCCATCG AGGTTGCTGA GGTATGCCCT GAAGGTCAAC CCTGCCCAGA AATGTACCTG
CAAATGCAGG CAAACTATGC CGCCCGCATC TATGCCCTGG CAATTGCAAT GAACATGCGC
GGCATTCTCT GGTATACGCT GCTGGAACAG GGAAGGGGTT TTCAGAACAG TCATCTGGCG
GATCTCAGCA GTAGCGGCGT GACACCGCGA CCGGCATTCT ATGCCTACCG CAATGCCGCG
CTCCTGCTGC GCGACGCGGT ATACACCGGT CCGCCGCTTA CCGATGTGCG GTTCGATCGG
GACGGCATGG TGCAGACATT ACGCTTTGCC GCACACGATG GGGCACACTC CATCTCTTCT
GGCGACCCCG CGCCCCTGAC GAAGTCGGGT GGGGTCTTGT GGTGCAACCC GGCGCACGGG
CGATTTGCAT TTCGCACCCG GAGCGTCCGA CGCCGCTGA
|
|---|
| Protein sequence | MRSILLILIS TLLALIPSSS AGSGAATSTI YLPLVSVPDT RVLIGYDLRT NRGAHAEPLL
PALPASWARA GDLVWATIEP TRGVYSWEAA AALEANIRRL RAAGIEPIVL VQIAPQWARR
LPGRTCSSVA PEAYADLARF ATAAATRYRS GDLNVRYWQF WNEPDFTPAI SDNNGSGCWN
TGQAPWYGGD AYGAALRVFA DAIRSVNPSA QIIGGNFAHF WPDDRQTIGF LRGMIEGSGL
ACDMIGFTGY TYWGSAERMT LKAQSLRRAL ATYGLQHMPL AAIEVAEVCP EGQPCPEMYL
QMQANYAARI YALAIAMNMR GILWYTLLEQ GRGFQNSHLA DLSSSGVTPR PAFYAYRNAA
LLLRDAVYTG PPLTDVRFDR DGMVQTLRFA AHDGAHSISS GDPAPLTKSG GVLWCNPAHG
RFAFRTRSVR RR
|
|---|
| |