Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0350 |
Symbol | |
ID | 5207285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 446805 |
End bp | 447962 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593976 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001274732 |
Protein GI | 148654527 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.341427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACC GATTCAATGC CATTATGACG ACCCGCGCCA CCGATGTTGA CGTGCAGCGT CGCGCGCTGG CGGTCATGCA ACTGATCGCT GCGATGCTGG TGGCGAATGT CCTGTTTCTT GCGCTCGGTC TGCTGTCATC AGGCGCGCAG AGTGCGTTCA TTCCGATTGC CAGCAGCATC TGCTTCATTG GGGCATTTGT CCTCGCCCGG CAGGGGCGCG CCAGCGTTGC GGCGTGGATC GTTATTCTCG CCTTTCTCGC CGGCGCCATG ATCGCAGTCA CCAGGACACC ACCTGAACAG GCATCAAACG TGGGGTATTT CCTGACCGCC CTGATCGTGA TTGCGAGTCT GACTCTTACC CCAGGGCAAC TCTGGCTGGT CACGTTTGGA GTCGTTGCCA GTTTTCTTGC GACGCTTGCT CTCGCGCATC CTGGCTTCTG GGATATGGCC CCGGTTCGTT TGCATACCAT GAACAGTAGT GTACTGCTCG TGGTTGTCGG CTTTGTATCG TATGTCGGGG CGCGCCTTGC GCGGCGCGCG ATTAACGAGG CGCATCAGGC GCGCGCGCTG GCGGAGCGGA TGCAGGCTGA ACTGGCGCAG GCGAATGCGC AACTGGAAAC GCGCGTTGCA GAGCGCACGA CTGAGTTGAG TCGGACGCTC GCGGCGCAAC AGGCGCTGAC CGCAGAGTTG CAGCGCAGCC TGGCAGCTCA GCAGGAACTC AGTCAGATCA TCCTCGAACT TTCGCTGCCG GTCATTCCTG TGCGTGAAGG AACCGTCGTT GTGCCCCTCT CCGGCACGAT CGATAGCACA CGAGCGGCGA AGTTGACCGA GAGCGTTCTC AGGGTCGTCG AGCAGCGTCA TATCCATACC GTCATTCTGG ACATCACCGG CGTGCCGATT GTCGATACCC AGGTAGCGCA GGCGCTGGTG CGCACCGCCA GCGCTGCCCG GTTGATGGGG GCGGAAACGA TACTGGTCGG CATTCGACCG GAAGTTGCGC AGACGCTGAT CGGTCTGGGC ATTCACCTTG GTCTGCGCAC TGCAGCAACG TTGCAGGAAG GGCTGGAACT GCCGACGAGG GACGCGCGCA GGCGCAACGG TGGCGCTGTT GCGCCTGGGC GAATGAAGGC GTCGTATGAA GATACTTCTG ATCGGTAA
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Protein sequence | MRDRFNAIMT TRATDVDVQR RALAVMQLIA AMLVANVLFL ALGLLSSGAQ SAFIPIASSI CFIGAFVLAR QGRASVAAWI VILAFLAGAM IAVTRTPPEQ ASNVGYFLTA LIVIASLTLT PGQLWLVTFG VVASFLATLA LAHPGFWDMA PVRLHTMNSS VLLVVVGFVS YVGARLARRA INEAHQARAL AERMQAELAQ ANAQLETRVA ERTTELSRTL AAQQALTAEL QRSLAAQQEL SQIILELSLP VIPVREGTVV VPLSGTIDST RAAKLTESVL RVVEQRHIHT VILDITGVPI VDTQVAQALV RTASAARLMG AETILVGIRP EVAQTLIGLG IHLGLRTAAT LQEGLELPTR DARRRNGGAV APGRMKASYE DTSDR
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