Gene RoseRS_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0350 
Symbol 
ID5207285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp446805 
End bp447962 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content61% 
IMG OID640593976 
Productanti-sigma-factor antagonist 
Protein accessionYP_001274732 
Protein GI148654527 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.341427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC GATTCAATGC CATTATGACG ACCCGCGCCA CCGATGTTGA CGTGCAGCGT 
CGCGCGCTGG CGGTCATGCA ACTGATCGCT GCGATGCTGG TGGCGAATGT CCTGTTTCTT
GCGCTCGGTC TGCTGTCATC AGGCGCGCAG AGTGCGTTCA TTCCGATTGC CAGCAGCATC
TGCTTCATTG GGGCATTTGT CCTCGCCCGG CAGGGGCGCG CCAGCGTTGC GGCGTGGATC
GTTATTCTCG CCTTTCTCGC CGGCGCCATG ATCGCAGTCA CCAGGACACC ACCTGAACAG
GCATCAAACG TGGGGTATTT CCTGACCGCC CTGATCGTGA TTGCGAGTCT GACTCTTACC
CCAGGGCAAC TCTGGCTGGT CACGTTTGGA GTCGTTGCCA GTTTTCTTGC GACGCTTGCT
CTCGCGCATC CTGGCTTCTG GGATATGGCC CCGGTTCGTT TGCATACCAT GAACAGTAGT
GTACTGCTCG TGGTTGTCGG CTTTGTATCG TATGTCGGGG CGCGCCTTGC GCGGCGCGCG
ATTAACGAGG CGCATCAGGC GCGCGCGCTG GCGGAGCGGA TGCAGGCTGA ACTGGCGCAG
GCGAATGCGC AACTGGAAAC GCGCGTTGCA GAGCGCACGA CTGAGTTGAG TCGGACGCTC
GCGGCGCAAC AGGCGCTGAC CGCAGAGTTG CAGCGCAGCC TGGCAGCTCA GCAGGAACTC
AGTCAGATCA TCCTCGAACT TTCGCTGCCG GTCATTCCTG TGCGTGAAGG AACCGTCGTT
GTGCCCCTCT CCGGCACGAT CGATAGCACA CGAGCGGCGA AGTTGACCGA GAGCGTTCTC
AGGGTCGTCG AGCAGCGTCA TATCCATACC GTCATTCTGG ACATCACCGG CGTGCCGATT
GTCGATACCC AGGTAGCGCA GGCGCTGGTG CGCACCGCCA GCGCTGCCCG GTTGATGGGG
GCGGAAACGA TACTGGTCGG CATTCGACCG GAAGTTGCGC AGACGCTGAT CGGTCTGGGC
ATTCACCTTG GTCTGCGCAC TGCAGCAACG TTGCAGGAAG GGCTGGAACT GCCGACGAGG
GACGCGCGCA GGCGCAACGG TGGCGCTGTT GCGCCTGGGC GAATGAAGGC GTCGTATGAA
GATACTTCTG ATCGGTAA
 
Protein sequence
MRDRFNAIMT TRATDVDVQR RALAVMQLIA AMLVANVLFL ALGLLSSGAQ SAFIPIASSI 
CFIGAFVLAR QGRASVAAWI VILAFLAGAM IAVTRTPPEQ ASNVGYFLTA LIVIASLTLT
PGQLWLVTFG VVASFLATLA LAHPGFWDMA PVRLHTMNSS VLLVVVGFVS YVGARLARRA
INEAHQARAL AERMQAELAQ ANAQLETRVA ERTTELSRTL AAQQALTAEL QRSLAAQQEL
SQIILELSLP VIPVREGTVV VPLSGTIDST RAAKLTESVL RVVEQRHIHT VILDITGVPI
VDTQVAQALV RTASAARLMG AETILVGIRP EVAQTLIGLG IHLGLRTAAT LQEGLELPTR
DARRRNGGAV APGRMKASYE DTSDR