| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0330 |
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| Symbol | |
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| ID | 5207265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 419550 |
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| End bp | 421157 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640593956 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001274712 |
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| Protein GI | 148654507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000340911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00581399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTGAGC CCGTGGCCAC AGCCCGGCAC TGGGCTGTAG CATGCTGCAC CTTTACAATC
GAGCAGGAGG ATGTTGTGCA ATGGCTCATA TGGGCCTTGC CTGCCCTGGT GATCGGACTT
GCCATTGGCG CAGGCATAGG CATTCTTATC TACAAAAAGA GTGTACAGAG CCAGATTCGA
CAGATCGAGG CGGAAGCCCG ACTGCAACTG GAAGCGACGC GATCTGAGCA GAAAGATCTC
ATTTTGCGCG CGACCGACGA GGCGCTTCGG CTCCGCGCTG AAGCCGAGGC GCAAATACGC
GAGGCGCGCG CAGCGCTGGC GAAGCAGGAA GAACGGTTGC AACGGAAAGA GGAAAATCTT
GACCGCAAAA TCGAGGGACT CGAACGGCGT GAACGTCAAC TCCAGCAACG CGAGCGCCAG
ATGGAGCAAC TTCATCAGGA AGCTGAACAA CTGCGTCAGC AGCAACGCGC GGAACTCGAG
CGGATTTCCG CGTTGAGCCA GGAAGAAGCC CGTGCGATTA TTCTGAAACG CGTCGAGGAT
GAAACGCGCG ACGAGGCGGC ACGCCGTATT CGTGAAATCG AAAAGAACGT TCGCGAAGAG
GCGGATAAAC TGGCACGCAA AGTGATCAGC ATGGCCATTC AGCGGTGCGC TTCGGAGTAT
GTCGCTGAAG TGACCGTCTC CACCGTCGCG CTCCCGAGTG AAGAGTTGAA AGGACGAATC
ATCGGGCGTG AGGGGCGCAA CATTCGCGCC TTCGAGCAAC TTACCGGCGT TGATATTATT
GTCGATGACA CGCCGGAAGC GGTGACCCTC TCGTGCCACG ATCCGGTGCG GCGGGAAGTG
GCGCGACTGG CGTTGATCAA GTTGCTCAAG GATGGGCGCA TCCATCCGAC GCGGATTGAA
GAAGTCGTCA GCAAAACCCA GCAGGAAGTC GAACAGATCA TGCGCGAAGA GGGCGAACGA
GTCGCCTACG AAGCGAACGT TCAGGGGTTG CACCCCGACC TGATCAAACT GCTGGGGCGA
CTGAAATATC GCACGAGTTA CGGGCAGAAT GTTCTGCAGC ATTCGCTGGA GTGCGCTCTG
CTCGCAGCGC ATATTGCTGC CGAGATCGGC GCAAACATCA ATGTGGCGAA AACTGCCGCG
TTACTGCACG ATATCGGGAA AGCAGTCGAC CACGAAGTGC AGGGACCGCA CGCATTGATC
GGTGCTGAGA TTGCGCGTCG CCTTGGAAAA TCGCCGGCAA TTGTGCACGC GATTGCCGCC
CATCATAACG ATGAAGAACC GCAAACCGTC GAAGCCTGGT TGGTGCAGGC TGTCGACGCC
ATCTCCGGCG GGCGCCCCGG AGCGCGCCGC GAAACGCTCG ACCTGTATAT CAAGCGCCTC
GAAGCGCTCG AAACGGTCGC AACGTCATTT ACAGGCGTTC AACGCGCCTT TGCTGTTCAG
GCCGGGCGCG AGGTTCGCGT GATGGTGCAA CCGGATGCTA TCGACGACCT CGGCAGTATT
CACCTTGCCC GTGATGTTGC CAAAAAGATC GAGGAGAGTC TTCAGTATCC CGGCCAGATC
AAGGTGACGG TCATCCGCGA GACGCGCGCA GTGGACTATG CACGTTGA
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| Protein sequence | MFEPVATARH WAVACCTFTI EQEDVVQWLI WALPALVIGL AIGAGIGILI YKKSVQSQIR
QIEAEARLQL EATRSEQKDL ILRATDEALR LRAEAEAQIR EARAALAKQE ERLQRKEENL
DRKIEGLERR ERQLQQRERQ MEQLHQEAEQ LRQQQRAELE RISALSQEEA RAIILKRVED
ETRDEAARRI REIEKNVREE ADKLARKVIS MAIQRCASEY VAEVTVSTVA LPSEELKGRI
IGREGRNIRA FEQLTGVDII VDDTPEAVTL SCHDPVRREV ARLALIKLLK DGRIHPTRIE
EVVSKTQQEV EQIMREEGER VAYEANVQGL HPDLIKLLGR LKYRTSYGQN VLQHSLECAL
LAAHIAAEIG ANINVAKTAA LLHDIGKAVD HEVQGPHALI GAEIARRLGK SPAIVHAIAA
HHNDEEPQTV EAWLVQAVDA ISGGRPGARR ETLDLYIKRL EALETVATSF TGVQRAFAVQ
AGREVRVMVQ PDAIDDLGSI HLARDVAKKI EESLQYPGQI KVTVIRETRA VDYAR
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