Gene RoseRS_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0299 
Symbol 
ID5207234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp383091 
End bp386555 
Gene Length3465 bp 
Protein Length1154 aa 
Translation table11 
GC content57% 
IMG OID640593925 
Producthypothetical protein 
Protein accessionYP_001274681 
Protein GI148654476 
COG category[V] Defense mechanisms 
COG ID[COG1002] Type II restriction enzyme, methylase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC TGGAACGCAT CCGTCAAGCC CTGGAATCGT GCGGGCAAAA TCAGGGGAAC 
ATCCCCGACC AGATAATGTC GCTCTTTTGT AAGGAACTCG GCTGGGGCCG CCCACGTGGT
CTGATGCCAC GCACCCTGCA ACCGGGCGCT CCTGTCTCGC GCCAGGTGAC GGCTGTGCCG
GTGGCGCAGA TGAGCGATCT GCCGGTGTAC CTGGTTGACT GGCCCGATGA CAGACTTCCC
GGAACCACTG CGCGGCGCGC CGTGCAGCGG GCGCTTGATC CAACGCATGC CGAACATGTG
TTGGTGTATG TTGCCCGGAA CCGGCGCCAG CTTGCCTTCA CCCGGGCGCG CCAGCGTTCT
GACGGAAAGA TTGAACTGCG CACCCTGCCG TATGACGTCG GCTCACCGGC CCGCACCACC
GTCGAGCGGC TGGCGGAACT GGCGTTCAGC CTCGATGAAC TCAGTGCAGG CGAGCCGCCG
ATAACCCGCG TGACCGATAA GCTCAATGCG GCGTTCAGCG TGGAGGCGGT GACGAAGCAG
TTCTACCAGG AGATTGCCAG CTGGTACTTC TGGGCGCTGG AGCATGTGCG CTTTCCGAAG
GATGCGCCAA AGACCGACGG CAAAGATCAC GTGAGTCTCA TCCGCCTGAT TACCCGTCTT
ATCTTTTGCT GGTTTCTGAA AGAAAAGGGT CTCATTCCGG CAACCCTCTT CGATCCGAAA
TCGTTAACTG CAATGCTCAA CGGTTTCGCG CCGCATGCGA TGCACGACAC CTCCTCCGTC
TTCTACAAAG CTATTCTGCA GAACCTCTTC TTTGCCACGC TGAACACGGA GATGGGCAGG
CGCGACTGGG CAAAGGACGA ACAGAACTTC ATGGCGCACA ATCTCTATCG ACACAGGGAA
CTGTTCCGTG ATCCGGAGAC AGCCCTGGAA CTGTTCAAGG ACATCCCCTT TCTCAACGGC
GGTTTGTTCG AGTGCCTCGA CCGTATCGAA GGCACAAAGG ATCAACCGCG CTACATTCGG
ATTGATGGTT TCTCCCGTCG CCCAGACAGC CAGCCGGTTG TGCCGGACGC TCTCTTCTTC
GGCGAGGAAC GGGAAGTCGA TCTGAGCAAA ACCTACGGCG AAGCGCGCTA CCGCCGCACC
CGCGTGCGTG GTCTGATGCA CACCCTTGCT TCCTACAACT TCACGCTTAC GGAGAATACG
CCTTTCGATC ATGATGTTGC GCTTGATCCA GAACTGTTGG GCCAGGTCTT CGAGAACCTG
CTGGCTGCCT ACAACCCGGA AACCCGCACC ACCGCACGCA AAGCTACCGG CTCCTACTAC
ACCCCACGCG AAATTGTGGA CTACATGGTG GAAGAAGCGC TCATCGCATG CCTGACACTC
AAACTGGAAA CCGCGATCCC TGACATCCAG AACGTCGAAG CGCGTCTCCG CCATCTTTTC
GCGTACAACG ATGAACCGCA CCAGTTCACG GATGCCGAAG TTGAAGCGCT CATCCACGCC
ATTGACCACC TGAAGATTCT CGACCCCGCC TGCGGATCGG GGGCATTTCC GATGGGTATC
TTGCATAAGC TGGTGTTTAT CCTCGGCAGG CTCGATCCCG GCAACGCCCG CTGGAAAGAG
CGGCAAATCG CCAAAGCCCA GGAGATTCCC GACCCTGCCG TGCGCGACAA AGTGATTCAC
GATATTGAGC AGGTCTTCAC CGCCAACGAA CTCGACTACG GACGCAAGCT CTACCTGATC
GAGAACTGCA TCTACGGCGT AGACATTCAG CCCATCGCGG TGCAGATCGC CAAACTGCGC
TTCTTTATCT CGCTGGTGGT GGATCAGCGC GTCAATCCGA ACGCGGAAAA CCTCGGCATC
CTGGCGCTGC CCAATCTGGA AACGCGCTTC GTGGCGGCCA ACACATTGAT CGGCATCGAT
CGACCGCAGC AACTCGCATT CCGCAATTCG AGGATCGACG AACTGGAGCG CGAACTGGCG
CGGGTGCGCG AAGCTCATTT CACCGCCAAA ACTCCTGCCA CCAAACGCAA ATACCGCGAA
CGCGACGCCG CATTGCGCGC TGAGATTGCC GAAATACTGA AGACCGACGG CTGGGACGAC
AAAACCGCCC GCATGCTCGC CGGGTGGGAC CCCTACGACC AGAATGCCTC AGCGTCCTTT
TTCGATCCGG AGTGGATGTT TGGCATCCGC GACGGCTTTG ACATCGTTAT CGGCAACCCG
CCGTATGTGC GGCAGGAGGA GATCAAGGAG TTGAAGCCAT TGCTGCAAGC CCAGGGGTAT
CAGTGCTATA CCGGTACGGC AGACCTCTAC GTGTATTTCT ACGAGCGCGC CCTCAATCTT
CTTCGCCACG GCGGCATTCT GTCCTTTATT TCCAGCAACA AGTTCTTCCG CTCCGCCTAT
GGTCAGAAGC TGCGCGAACT TCTCGCCCGC CAGACCCTGC ACTGCATTAT TGATTTCGGC
GACGCGCCGG TCTTCACAGC CATCGCCTAC CCGACCATTC TTGTCCTGAG CAAAGCACCA
GCGGCTGACT CCCAACTCCG CGCCCTGAAC TGGCAGCCCG GGCCGCCGGT GGAGGAATTT
CCCCATGTCT TTCGCGCCCA CAGCTTCCTG CTCGCACAAC GTGAACTTCG TCCTGACGGC
TGGCGACTGG AATCGCCCGT CAACCTCCGG CTGCTGGACA AACTCCGCGC CGCCGGCACA
CCGCTGGGCG AATACGTCAA CGGGCGGCTC TATCGTGGGA TATTGACCGG TCTGAACGAA
GCCTTTGTGG TAGACCGCGC CACCCGCGAC CGTCTCATCG CCGAACATCC TTCATCCGCC
GACGTGCTCA AGCCTTTCCT TCGCGGCCGT GACATCAAAC GCTGGCGGGT GGAACCGCAG
GATTTGTGGC TCATCTTCAC CAGGCGTGGG ATCAACATCA AAGAGTATCC GGCTGTTTAC
GAGCATCTTC TGCCTTTCAA AAAGCGTCTG ATGCCCGGTG TGCCCGGCGG CAGGAAGCCC
GGCAGCTACG AGTGGTATGA AATCCAAGAC AACATTGCCT ACTGGCAGGA ATTCGAGCGG
CCGAAGATTG TGTATCCCAA TATATGTAAG CAAAATGAAT TTGCTTGGGA AGACAGCAGT
TTTTATACAA ACCAAAAAGC CTTTATTATT ACCGAAGTAA GTAAATATCT ACTGGGGATT
CTAAATTCAT CTGTCATTAT GTGGCTTTTT ACTCAACTAC TGGCAAAGTT ACAAAATGAT
TTTTATGAGC CAAGCGCCAT ATTCATGAAA AAATTTCCAA TACCTAACCC ACGAACCGAA
GAGTGCAAGG TTTTAGAGAC ATTGGTGGAC AGGATTCTGG CGGCAAAACA AGCCAATCCA
CAGGCGGACG TGACAGACCT GGAACGCGAG ATTGACGAGC GCATCTATCG TCTCTACGGA
CTGACGCCGG AGGAGATAAG GATTGTGGAG GAGTCGTTGA AATAA
 
Protein sequence
MSNLERIRQA LESCGQNQGN IPDQIMSLFC KELGWGRPRG LMPRTLQPGA PVSRQVTAVP 
VAQMSDLPVY LVDWPDDRLP GTTARRAVQR ALDPTHAEHV LVYVARNRRQ LAFTRARQRS
DGKIELRTLP YDVGSPARTT VERLAELAFS LDELSAGEPP ITRVTDKLNA AFSVEAVTKQ
FYQEIASWYF WALEHVRFPK DAPKTDGKDH VSLIRLITRL IFCWFLKEKG LIPATLFDPK
SLTAMLNGFA PHAMHDTSSV FYKAILQNLF FATLNTEMGR RDWAKDEQNF MAHNLYRHRE
LFRDPETALE LFKDIPFLNG GLFECLDRIE GTKDQPRYIR IDGFSRRPDS QPVVPDALFF
GEEREVDLSK TYGEARYRRT RVRGLMHTLA SYNFTLTENT PFDHDVALDP ELLGQVFENL
LAAYNPETRT TARKATGSYY TPREIVDYMV EEALIACLTL KLETAIPDIQ NVEARLRHLF
AYNDEPHQFT DAEVEALIHA IDHLKILDPA CGSGAFPMGI LHKLVFILGR LDPGNARWKE
RQIAKAQEIP DPAVRDKVIH DIEQVFTANE LDYGRKLYLI ENCIYGVDIQ PIAVQIAKLR
FFISLVVDQR VNPNAENLGI LALPNLETRF VAANTLIGID RPQQLAFRNS RIDELERELA
RVREAHFTAK TPATKRKYRE RDAALRAEIA EILKTDGWDD KTARMLAGWD PYDQNASASF
FDPEWMFGIR DGFDIVIGNP PYVRQEEIKE LKPLLQAQGY QCYTGTADLY VYFYERALNL
LRHGGILSFI SSNKFFRSAY GQKLRELLAR QTLHCIIDFG DAPVFTAIAY PTILVLSKAP
AADSQLRALN WQPGPPVEEF PHVFRAHSFL LAQRELRPDG WRLESPVNLR LLDKLRAAGT
PLGEYVNGRL YRGILTGLNE AFVVDRATRD RLIAEHPSSA DVLKPFLRGR DIKRWRVEPQ
DLWLIFTRRG INIKEYPAVY EHLLPFKKRL MPGVPGGRKP GSYEWYEIQD NIAYWQEFER
PKIVYPNICK QNEFAWEDSS FYTNQKAFII TEVSKYLLGI LNSSVIMWLF TQLLAKLQND
FYEPSAIFMK KFPIPNPRTE ECKVLETLVD RILAAKQANP QADVTDLERE IDERIYRLYG
LTPEEIRIVE ESLK