Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0299 |
Symbol | |
ID | 5207234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 383091 |
End bp | 386555 |
Gene Length | 3465 bp |
Protein Length | 1154 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640593925 |
Product | hypothetical protein |
Protein accession | YP_001274681 |
Protein GI | 148654476 |
COG category | [V] Defense mechanisms |
COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.309485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC TGGAACGCAT CCGTCAAGCC CTGGAATCGT GCGGGCAAAA TCAGGGGAAC ATCCCCGACC AGATAATGTC GCTCTTTTGT AAGGAACTCG GCTGGGGCCG CCCACGTGGT CTGATGCCAC GCACCCTGCA ACCGGGCGCT CCTGTCTCGC GCCAGGTGAC GGCTGTGCCG GTGGCGCAGA TGAGCGATCT GCCGGTGTAC CTGGTTGACT GGCCCGATGA CAGACTTCCC GGAACCACTG CGCGGCGCGC CGTGCAGCGG GCGCTTGATC CAACGCATGC CGAACATGTG TTGGTGTATG TTGCCCGGAA CCGGCGCCAG CTTGCCTTCA CCCGGGCGCG CCAGCGTTCT GACGGAAAGA TTGAACTGCG CACCCTGCCG TATGACGTCG GCTCACCGGC CCGCACCACC GTCGAGCGGC TGGCGGAACT GGCGTTCAGC CTCGATGAAC TCAGTGCAGG CGAGCCGCCG ATAACCCGCG TGACCGATAA GCTCAATGCG GCGTTCAGCG TGGAGGCGGT GACGAAGCAG TTCTACCAGG AGATTGCCAG CTGGTACTTC TGGGCGCTGG AGCATGTGCG CTTTCCGAAG GATGCGCCAA AGACCGACGG CAAAGATCAC GTGAGTCTCA TCCGCCTGAT TACCCGTCTT ATCTTTTGCT GGTTTCTGAA AGAAAAGGGT CTCATTCCGG CAACCCTCTT CGATCCGAAA TCGTTAACTG CAATGCTCAA CGGTTTCGCG CCGCATGCGA TGCACGACAC CTCCTCCGTC TTCTACAAAG CTATTCTGCA GAACCTCTTC TTTGCCACGC TGAACACGGA GATGGGCAGG CGCGACTGGG CAAAGGACGA ACAGAACTTC ATGGCGCACA ATCTCTATCG ACACAGGGAA CTGTTCCGTG ATCCGGAGAC AGCCCTGGAA CTGTTCAAGG ACATCCCCTT TCTCAACGGC GGTTTGTTCG AGTGCCTCGA CCGTATCGAA GGCACAAAGG ATCAACCGCG CTACATTCGG ATTGATGGTT TCTCCCGTCG CCCAGACAGC CAGCCGGTTG TGCCGGACGC TCTCTTCTTC GGCGAGGAAC GGGAAGTCGA TCTGAGCAAA ACCTACGGCG AAGCGCGCTA CCGCCGCACC CGCGTGCGTG GTCTGATGCA CACCCTTGCT TCCTACAACT TCACGCTTAC GGAGAATACG CCTTTCGATC ATGATGTTGC GCTTGATCCA GAACTGTTGG GCCAGGTCTT CGAGAACCTG CTGGCTGCCT ACAACCCGGA AACCCGCACC ACCGCACGCA AAGCTACCGG CTCCTACTAC ACCCCACGCG AAATTGTGGA CTACATGGTG GAAGAAGCGC TCATCGCATG CCTGACACTC AAACTGGAAA CCGCGATCCC TGACATCCAG AACGTCGAAG CGCGTCTCCG CCATCTTTTC GCGTACAACG ATGAACCGCA CCAGTTCACG GATGCCGAAG TTGAAGCGCT CATCCACGCC ATTGACCACC TGAAGATTCT CGACCCCGCC TGCGGATCGG GGGCATTTCC GATGGGTATC TTGCATAAGC TGGTGTTTAT CCTCGGCAGG CTCGATCCCG GCAACGCCCG CTGGAAAGAG CGGCAAATCG CCAAAGCCCA GGAGATTCCC GACCCTGCCG TGCGCGACAA AGTGATTCAC GATATTGAGC AGGTCTTCAC CGCCAACGAA CTCGACTACG GACGCAAGCT CTACCTGATC GAGAACTGCA TCTACGGCGT AGACATTCAG CCCATCGCGG TGCAGATCGC CAAACTGCGC TTCTTTATCT CGCTGGTGGT GGATCAGCGC GTCAATCCGA ACGCGGAAAA CCTCGGCATC CTGGCGCTGC CCAATCTGGA AACGCGCTTC GTGGCGGCCA ACACATTGAT CGGCATCGAT CGACCGCAGC AACTCGCATT CCGCAATTCG AGGATCGACG AACTGGAGCG CGAACTGGCG CGGGTGCGCG AAGCTCATTT CACCGCCAAA ACTCCTGCCA CCAAACGCAA ATACCGCGAA CGCGACGCCG CATTGCGCGC TGAGATTGCC GAAATACTGA AGACCGACGG CTGGGACGAC AAAACCGCCC GCATGCTCGC CGGGTGGGAC CCCTACGACC AGAATGCCTC AGCGTCCTTT TTCGATCCGG AGTGGATGTT TGGCATCCGC GACGGCTTTG ACATCGTTAT CGGCAACCCG CCGTATGTGC GGCAGGAGGA GATCAAGGAG TTGAAGCCAT TGCTGCAAGC CCAGGGGTAT CAGTGCTATA CCGGTACGGC AGACCTCTAC GTGTATTTCT ACGAGCGCGC CCTCAATCTT CTTCGCCACG GCGGCATTCT GTCCTTTATT TCCAGCAACA AGTTCTTCCG CTCCGCCTAT GGTCAGAAGC TGCGCGAACT TCTCGCCCGC CAGACCCTGC ACTGCATTAT TGATTTCGGC GACGCGCCGG TCTTCACAGC CATCGCCTAC CCGACCATTC TTGTCCTGAG CAAAGCACCA GCGGCTGACT CCCAACTCCG CGCCCTGAAC TGGCAGCCCG GGCCGCCGGT GGAGGAATTT CCCCATGTCT TTCGCGCCCA CAGCTTCCTG CTCGCACAAC GTGAACTTCG TCCTGACGGC TGGCGACTGG AATCGCCCGT CAACCTCCGG CTGCTGGACA AACTCCGCGC CGCCGGCACA CCGCTGGGCG AATACGTCAA CGGGCGGCTC TATCGTGGGA TATTGACCGG TCTGAACGAA GCCTTTGTGG TAGACCGCGC CACCCGCGAC CGTCTCATCG CCGAACATCC TTCATCCGCC GACGTGCTCA AGCCTTTCCT TCGCGGCCGT GACATCAAAC GCTGGCGGGT GGAACCGCAG GATTTGTGGC TCATCTTCAC CAGGCGTGGG ATCAACATCA AAGAGTATCC GGCTGTTTAC GAGCATCTTC TGCCTTTCAA AAAGCGTCTG ATGCCCGGTG TGCCCGGCGG CAGGAAGCCC GGCAGCTACG AGTGGTATGA AATCCAAGAC AACATTGCCT ACTGGCAGGA ATTCGAGCGG CCGAAGATTG TGTATCCCAA TATATGTAAG CAAAATGAAT TTGCTTGGGA AGACAGCAGT TTTTATACAA ACCAAAAAGC CTTTATTATT ACCGAAGTAA GTAAATATCT ACTGGGGATT CTAAATTCAT CTGTCATTAT GTGGCTTTTT ACTCAACTAC TGGCAAAGTT ACAAAATGAT TTTTATGAGC CAAGCGCCAT ATTCATGAAA AAATTTCCAA TACCTAACCC ACGAACCGAA GAGTGCAAGG TTTTAGAGAC ATTGGTGGAC AGGATTCTGG CGGCAAAACA AGCCAATCCA CAGGCGGACG TGACAGACCT GGAACGCGAG ATTGACGAGC GCATCTATCG TCTCTACGGA CTGACGCCGG AGGAGATAAG GATTGTGGAG GAGTCGTTGA AATAA
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Protein sequence | MSNLERIRQA LESCGQNQGN IPDQIMSLFC KELGWGRPRG LMPRTLQPGA PVSRQVTAVP VAQMSDLPVY LVDWPDDRLP GTTARRAVQR ALDPTHAEHV LVYVARNRRQ LAFTRARQRS DGKIELRTLP YDVGSPARTT VERLAELAFS LDELSAGEPP ITRVTDKLNA AFSVEAVTKQ FYQEIASWYF WALEHVRFPK DAPKTDGKDH VSLIRLITRL IFCWFLKEKG LIPATLFDPK SLTAMLNGFA PHAMHDTSSV FYKAILQNLF FATLNTEMGR RDWAKDEQNF MAHNLYRHRE LFRDPETALE LFKDIPFLNG GLFECLDRIE GTKDQPRYIR IDGFSRRPDS QPVVPDALFF GEEREVDLSK TYGEARYRRT RVRGLMHTLA SYNFTLTENT PFDHDVALDP ELLGQVFENL LAAYNPETRT TARKATGSYY TPREIVDYMV EEALIACLTL KLETAIPDIQ NVEARLRHLF AYNDEPHQFT DAEVEALIHA IDHLKILDPA CGSGAFPMGI LHKLVFILGR LDPGNARWKE RQIAKAQEIP DPAVRDKVIH DIEQVFTANE LDYGRKLYLI ENCIYGVDIQ PIAVQIAKLR FFISLVVDQR VNPNAENLGI LALPNLETRF VAANTLIGID RPQQLAFRNS RIDELERELA RVREAHFTAK TPATKRKYRE RDAALRAEIA EILKTDGWDD KTARMLAGWD PYDQNASASF FDPEWMFGIR DGFDIVIGNP PYVRQEEIKE LKPLLQAQGY QCYTGTADLY VYFYERALNL LRHGGILSFI SSNKFFRSAY GQKLRELLAR QTLHCIIDFG DAPVFTAIAY PTILVLSKAP AADSQLRALN WQPGPPVEEF PHVFRAHSFL LAQRELRPDG WRLESPVNLR LLDKLRAAGT PLGEYVNGRL YRGILTGLNE AFVVDRATRD RLIAEHPSSA DVLKPFLRGR DIKRWRVEPQ DLWLIFTRRG INIKEYPAVY EHLLPFKKRL MPGVPGGRKP GSYEWYEIQD NIAYWQEFER PKIVYPNICK QNEFAWEDSS FYTNQKAFII TEVSKYLLGI LNSSVIMWLF TQLLAKLQND FYEPSAIFMK KFPIPNPRTE ECKVLETLVD RILAAKQANP QADVTDLERE IDERIYRLYG LTPEEIRIVE ESLK
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